DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and Tmprss6

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_001426443.1 Gene:Tmprss6 / 315388 RGDID:1307138 Length:811 Species:Rattus norvegicus


Alignment Length:252 Identity:102/252 - (40%)
Similarity:143/252 - (56%) Gaps:19/252 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 CSCGNINTRHRIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVNGFYH------ 130
            |.||......|||||..:...|:||...|...|...||.:|:.|::.:|||||   |..      
  Rat   566 CDCGLQGPSSRIVGGAMSSEGEWPWQASLQIRGRHICGGALIADRWVITAAHC---FQEDSMASP 627

  Fly   131 RLITV---RLLEHNRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCM 192
            ||.||   ::.:::|....|..   :|||:.:||.:...:.|.|:||::.:.||.....:.|||:
  Rat   628 RLWTVFLGKMRQNSRWPGEVSF---KVSRLFLHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCL 689

  Fly   193 PTPSENY-AGQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMICAGYVE 256
            |..|..: .||...:|||||..||||.|.|||:|:|.::.|:.| |..| ..::|..|:|||| .
  Rat   690 PARSHFFEPGQHCWITGWGAQREGGPGSSTLQKVDVQLIPQDLC-NEAY-RYQVTPRMLCAGY-R 751

  Fly   257 QGGKDSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWIAE 313
            :|.||:||||||||:........:.|||:||||.||.:||..||||||....:||.:
  Rat   752 KGKKDACQGDSGGPLVCKEPSGRWFLAGLVSWGLGCGRPNFFGVYTRVTRVVNWIQQ 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 98/241 (41%)
Tmprss6NP_001426443.1 None

Return to query results.
Submit another query.