DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG18735 and LOC312273

DIOPT Version :9

Sequence 1:	NP_652645.1	Gene:	CG18735 / 59137	FlyBaseID:	FBgn0042098	Length:	364	Species:	Drosophila melanogaster
Sequence 2:	NP_001101326.1	Gene:	LOC312273 / 312273	RGDID:	1563848	Length:	246	Species:	Rattus norvegicus

Alignment Length:	241	Identity:	95/241 - (39%)
Similarity:	135/241 - (56%)	Gaps:	26/241 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    82 RIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVNGFYHRLITVRLLEHN--RQD 144
            |||||...:.|..|:.:.|. .|:..||.||:.||:.|:||||    ||..:.|||.|||  ..:
  Rat    24 RIVGGYTCQEHSVPYQVSLN-AGSHICGGSLITDQWVLSAAHC----YHPQLQVRLGEHNIYEIE 83

  Fly   145 SHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMP--TPSENYAGQTAVVT 207
            ...:.:|  .:::::||.|.....|:||.||:...|..|...:..:.:|  .|:   ||...:|:
  Rat    84 GAEQFID--AAKMILHPDYDKWTVDNDIMLIKLKSPATLNSKVSTIPLPQYCPT---AGTECLVS 143

  Fly   208 GWGALSEGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMICAGYVEQGGKDSCQGDSGGPMH 272
            |||.|..|......||.::.|:||...|..:.  ..:||:||.|.|::| |||||||.|||||:.
  Rat   144 GWGVLKFGFESPSVLQCLDAPVLSDSVCHKAY--PRQITNNMFCLGFLE-GGKDSCQYDSGGPVV 205

  Fly   273 VLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDW----IAEN 314
            ..|     ::.||||||:|||....|||||:|.::.:|    ||||
  Rat   206 CNG-----EVQGIVSWGDGCALEGKPGVYTKVCNYLNWIHQTIAEN 246

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG18735	NP_652645.1	Tryp_SPc	82..311	CDD:214473	91/236 (39%)
CG18735	NP_652645.1	Tryp_SPc	83..314	CDD:238113	92/238 (39%)
LOC312273	NP_001101326.1	Tryp_SPc	25..242	CDD:238113	90/234 (38%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100031
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810