DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18735 and svh-1

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:266 Identity:91/266 - (34%)
Similarity:142/266 - (53%) Gaps:42/266 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 CG----NINTRH-------RIVGGQETEVHEYPWMIMLMWFGN-----FYCGASLVNDQYALTAA 122
            ||    .:|.|.       |:|||.||....:||...|.   |     .:||||:::..:.:|||
 Worm   693 CGLRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAA 754

  Fly   123 HC------VNGFYHRLITVRLLEHNRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPV 181
            ||      |:.:.   :.|...::|:.|.:.:|.  .:.|:..:|.|.. .|..|||::....| 
 Worm   755 HCFEEDERVSSYE---VVVGDWDNNQTDGNEQIF--YLQRIHFYPLYKD-IFSHDIAILEIPYP- 812

  Fly   182 RLGIDMH----PVCMPTPSENYA-GQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYG 241
              ||:.:    |:|:|:....|. |:..||:|||::  |...::.||...:||:::.:|.||:..
 Worm   813 --GIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSM--GLRYAERLQAALIPIINRFDCVNSSQI 873

  Fly   242 ESKITDNMICAGYVEQGGKDSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGS 306
            .|.::.:..||||:| ||.||||||||||........|:.|||::|||:|||:...||:||.|..
 Worm   874 YSSMSRSAFCAGYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAP 937

  Fly   307 FNDWIA 312
            :..||:
 Worm   938 YLSWIS 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 86/246 (35%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 86/246 (35%)
Blue background indicates that the domain is not in the aligned region.

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