DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and Hgf

DIOPT Version :9

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_001276387.1 Gene:Hgf / 15234 MGIID:96079 Length:728 Species:Mus musculus


Alignment Length:244 Identity:60/244 - (24%)
Similarity:111/244 - (45%) Gaps:33/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 RIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVNG------FYHRLITVRLLEH 140
            |:|.|..|:. ...||:.|.:.....||.||:.:.:.|||..|...      .|...:.:..:..
Mouse   495 RVVNGIPTQT-TVGWMVSLKYRNKHICGGSLIKESWVLTARQCFPARNKDLKDYEAWLGIHDVHE 558

  Fly   141 NRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPT-----PSENYA 200
            ..::...:|::  :|:::..|:      .||:.|::...|..|...:..:.:|:     |.:.  
Mouse   559 RGEEKRKQILN--ISQLVYGPE------GSDLVLLKLARPAILDNFVSTIDLPSYGCTIPEKT-- 613

  Fly   201 GQTAVVTGW---GALSEGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMICAGYVEQGGKDS 262
              |..:.||   |.::..|    .|:...:.|:..|:|...:.|:..:.::.:||| .|:.|...
Mouse   614 --TCSIYGWGYTGLINADG----LLRVAHLYIMGNEKCSQHHQGKVTLNESELCAG-AEKIGSGP 671

  Fly   263 CQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWI 311
            |:||.|||: :........:.|::..|.|||.||.||::.||..:..||
Mouse   672 CEGDYGGPL-ICEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWI 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 82..311 CDD:214473 58/242 (24%)
Tryp_SPc 83..314 CDD:238113 59/243 (24%)
HgfNP_001276387.1 PAN_APPLE 41..123 CDD:238074
KR 127..209 CDD:214527
KR 211..289 CDD:214527
KR 305..385 CDD:214527
KR 389..471 CDD:238056
Tryp_SPc 495..719 CDD:214473 58/242 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.