DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and Cfi

DIOPT Version :9

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_031712.2 Gene:Cfi / 12630 MGIID:105937 Length:603 Species:Mus musculus


Alignment Length:259 Identity:85/259 - (32%)
Similarity:128/259 - (49%) Gaps:34/259 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SCG---NINTRH-RIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCV--NGFYHR 131
            |||   |.:||. |::||:...|.:|||.:.:.......||...:...:.|||||||  :..:..
Mouse   347 SCGVKRNTHTRRKRVIGGKPANVGDYPWQVAIKDGQRITCGGIYIGGCWILTAAHCVRPSRAHSY 411

  Fly   132 LITVRLLEHNRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMH-------- 188
            .:...||:..:.:|.:.|  :.|.||::|.||:...|.:|||||.        :.||        
Mouse   412 QVWTALLDWLKPNSQLGI--QTVKRVIVHEKYNGATFQNDIALIE--------MKMHTGKKECEL 466

  Fly   189 ----PVCMP-TPSENYAGQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYGESKITDN 248
                |.|:| :|.........:::|||...:...:. :|:..||.::.  .| :..|.:......
Mouse   467 PNSVPACVPWSPYLFQPNDRCIISGWGRGKDNQKVY-SLRWGEVDLIG--NC-SQFYPDRYYEKE 527

  Fly   249 MICAGYVEQGGKDSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWIA 312
            |.||| ...|..|:|:||||||:......:...:.|||||||.|.||..|||||||.::.|||:
Mouse   528 MQCAG-TRDGSIDACKGDSGGPLVCEDINNVTYVWGIVSWGENCGKPEFPGVYTRVANYFDWIS 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 82..311 CDD:214473 77/243 (32%)
Tryp_SPc 83..314 CDD:238113 78/245 (32%)
CfiNP_031712.2 FIMAC 46..111 CDD:214493
SR 117..220 CDD:214555
SRCR 122..219 CDD:278931
LDLa 232..261 CDD:238060
LDLa 264..298 CDD:294076
Tryp_SPc 360..589 CDD:214473 77/243 (32%)
Tryp_SPc 361..592 CDD:238113 78/245 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.