DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18735 and Agrn

DIOPT Version :9

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:XP_006538554.1 Gene:Agrn / 11603 MGIID:87961 Length:2057 Species:Mus musculus


Alignment Length:127 Identity:31/127 - (24%)
Similarity:40/127 - (31%) Gaps:47/127 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 HPVCMPTPSENYAGQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMICA 252
            || |.|.|                 ..||.:...| |..|.:.   :|....:|.:       ||
Mouse  1540 HP-CSPNP-----------------CHGGALCQAL-EAGVFLC---QCPPGRFGPT-------CA 1575

  Fly   253 GYVEQGGKDSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRVGSFNDWIAEN 314
            ........:.|.|.:  |.|||..|           |..||.|     ..|.|||.:.:.||
Mouse  1576 DEKNPCQPNPCHGSA--PCHVLSRG-----------GAKCACP-----LGRSGSFCETVLEN 1619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 82..311 CDD:214473 29/122 (24%)
Tryp_SPc 83..314 CDD:238113 29/125 (23%)
AgrnXP_006538554.1 NtA 46..148 CDD:367356
KAZAL 198..244 CDD:197624
KAZAL 274..319 CDD:197624
Kazal_1 351..391 CDD:333798
KAZAL_FS 423..463 CDD:238052
KAZAL 491..536 CDD:197624
KAZAL 556..601 CDD:197624
KAZAL 621..666 CDD:197624
KAZAL 706..752 CDD:197624
EGF_Lam 795..835 CDD:238012
Laminin_EGF 849..>885 CDD:365839
KAZAL 924..971 CDD:197624
SEA 1121..1245 CDD:214554
EGF 1322..1352 CDD:333761
Laminin_G_1 1389..1520 CDD:333802
Laminin_G_1 1657..1792 CDD:333802
EGF_CA 1814..1846 CDD:238011
Laminin_G_1 1910..2040 CDD:333802
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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