DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18735 and gprin3

DIOPT Version :9

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:XP_017951795.1 Gene:gprin3 / 101733019 XenbaseID:XB-GENE-6468967 Length:725 Species:Xenopus tropicalis


Alignment Length:341 Identity:63/341 - (18%)
Similarity:111/341 - (32%) Gaps:106/341 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SSPAKRECAECSCGNINTRHRIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYALTAAHCVN 126
            :||.:::|:..     :|.|::..| ..|.:...:.:......|..|.:::.::|          
 Frog    17 TSPVEKDCSAS-----DTLHQLTQG-ALENNGSVFSVSETCPANLICSSNMTSEQ---------- 65

  Fly   127 GFYHRLITVRLLEHNRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIR-FNEPVRLGIDMHPV 190
                          .||:|                       .|.|:..| .||     :::.|.
 Frog    66 --------------ERQES-----------------------GSGISSFRTCNE-----LELLPP 88

  Fly   191 CMPTPSENYAGQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMICAGYV 255
            .:|...::.|...:.:......::|..:  .|.:.::.:|.::...:    |..:.||.:.|..|
 Frog    89 LVPQAIKDSAQPISTIKNTYLSTDGNAV--LLSKAQLSLLDEKTAND----EKSVKDNTLVAPLV 147

  Fly   256 --EQG-------------------GKDS-CQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAK-PNA 297
              |.|                   |.|| .|.....|.  |.|...::...|.|..:..:. ..:
 Frog   148 SAEAGMQVSSDFKNKPLVESEPDKGLDSLLQNKEADPS--LPSLPTHKTESINSGTQNASTIIES 210

  Fly   298 PGVYTRVG-SFNDWIAEN-------TRDACSCAQPEAAGEPASPMETTEQGDQ-----EN-TTAN 348
            .||.|..| |..|.|..|       .:|.......|...:|..|....|.|..     || ||.:
 Frog   211 EGVITAEGESTKDSITSNECHKLSFEKDKIKKENEEVETDPPLPSRFKEMGTMTSFSLENWTTQD 275

  Fly   349 GAAEADPEVEEANKLI 364
            ...:|...||  ||.:
 Frog   276 AEVQAVANVE--NKSV 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 82..311 CDD:214473 41/253 (16%)
Tryp_SPc 83..314 CDD:238113 42/255 (16%)
gprin3XP_017951795.1 GRIN_C 600..720 CDD:373668
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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