DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and tmprss6

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:273 Identity:96/273 - (35%)
Similarity:144/273 - (52%) Gaps:26/273 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 AEWSSPAKRECAE------CSCGNINTRHRIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQY 117
            ||..|.|  :|.:      |.||......|:|||.:.:..|:||...|...|...||.:||.||:
 Frog   543 AECDSIA--DCPDGSDENNCGCGIQAVGIRLVGGTQAQEGEWPWQASLQVRGEHICGGTLVADQW 605

  Fly   118 ALTAAHCVNGFYHR--------LITVRLLEHNRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIAL 174
            .||||||.....:.        |..|||....:::...|::     |::|||.|...:.|.|:||
 Frog   606 ILTAAHCFTPESYASPEVWTVYLGKVRLSRSTQKELAFKVI-----RLVIHPFYDEDSHDYDVAL 665

  Fly   175 IRFNEPVRL-GIDMHPVCMPTPSENY-AGQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRN 237
            :..:..|.| ...:.|:|:|:.:.:: .|.:..|||||::.|.||.||.||:|::.:::|:.|  
 Frog   666 VLLDHLVPLTSPHVQPICLPSSTHHFPTGSSCWVTGWGSVKENGPTSDVLQKVDIQLVAQDIC-- 728

  Fly   238 SNYGESKITDNMICAGYVEQGGKDSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYT 302
            :.....:|:..|:|||| ..|.||:||||||.|:....:...:..||:||||.||..|...|||:
 Frog   729 TELYRYQISPRMLCAGY-RDGSKDACQGDSGSPLVCKTASGRWFQAGLVSWGAGCGIPRYFGVYS 792

  Fly   303 RVGSFNDWIAENT 315
            |:.....||...|
 Frog   793 RITRLVQWIESIT 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 86/240 (36%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060 5/18 (28%)
Tryp_SPc 572..804 CDD:238113 86/239 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.