DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18735 and gzma

DIOPT Version :10

Sequence 1:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:272 Identity:81/272 - (29%)
Similarity:132/272 - (48%) Gaps:26/272 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SSPAKRECAECSCGNI--------NTRHRIVGGQETEVHEYPWMIMLMWFGNFYCGASLVNDQYA 118
            :||..|..:.|...:|        |....|:.|:|...|..|:|..: :.....||.:|:...:.
 Frog     6 TSPRMRLFSFCLLSSILLLIHINGNICMDIIDGREAASHSRPYMAYI-YSRTGSCGGTLIKQNWV 69

  Fly   119 LTAAHCVNGFYHRLITVRLLEHNRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRL 183
            |||||||......::....:: :|::...:.   .|:|.:.||.:..:....||.|::.....:|
 Frog    70 LTAAHCVVNNSEVILGAHKVK-SRENEQQRF---SVARAIPHPCFEWKKKIHDIQLLQIKGAAKL 130

  Fly   184 GIDMHPVCMPTPSENY-AGQTAVVTGWGALSEGGPI-SDTLQEVEVPILSQEECRNSNYGESK-- 244
            ...:..:.:||...:. .|.:....|||.....|.. ||.|:||.|.::.:..| |..|.:.|  
 Frog   131 NKFVSVLKLPTTDMDVKPGSSCSTAGWGVTKPNGKTPSDVLREVNVTVVDRGTC-NKIYKKFKTE 194

  Fly   245 ITDNMICAGYVEQGGK--DSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGVYTRV-GS 306
            |:.||:|||..::..|  |:||||||||: :.|.    :.:||||:|:.|..|..||:|||: ..
 Frog   195 ISTNMLCAGAPKKSDKKYDACQGDSGGPL-ICGK----EFSGIVSFGKKCGDPKYPGIYTRLTAR 254

  Fly   307 FNDWIAENTRDA 318
            :..||.:.|..|
 Frog   255 YLQWIRDVTGGA 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 73/237 (31%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 73/237 (31%)

Return to query results.
Submit another query.