DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAP1GAP and gig

DIOPT Version :9

Sequence 1:NP_001375129.1 Gene:RAP1GAP / 5909 HGNCID:9858 Length:842 Species:Homo sapiens
Sequence 2:NP_524177.1 Gene:gig / 40201 FlyBaseID:FBgn0005198 Length:1847 Species:Drosophila melanogaster


Alignment Length:326 Identity:69/326 - (21%)
Similarity:125/326 - (38%) Gaps:92/326 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   180 LIVTFDEHVISNNFKFGVIYQKLGQTSEE-ELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGL 243
            |:..|:.|      |.||:|...||.:.| |:...:..|..:||||..:|..|.|::.:  :..|
  Fly  1591 LVPPFETH------KIGVLYVGQGQCNNEVEILRNSHGSARYVEFLRNIGTLVSLKEAE--QNNL 1647

Human   244 DVTHGQTGTESVYCNFRNKEIM---FHVSTKLPYT-EGDAQQLQRKRHIGNDIVAVVFQDENTPF 304
            .:...:.|.:..:......:|:   |||:|.:|.. :.|....::|.|||||.|.:::.:....:
  Fly  1648 FIMLDRNGADGKFAYIWKDDILQVTFHVATLMPTNLQDDPNCNEKKSHIGNDFVKIIYNESGEEY 1712

Human   305 VPDMIASNFLHAYVVVQAEGGGPDGPL----YKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFL 365
            ..:.|:..|.:|.|:|:        ||    .:|.|.||.::..|                    
  Fly  1713 NLNTISGQFNYACVIVE--------PLDLNSNRVYVKARSEISKF-------------------- 1749

Human   366 LTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFES 430
               :.:|||... :::.|.|..|..|         ||.:..|::    .:...:.......:.|.
  Fly  1750 ---VCHAEYRIV-SDRSAPLLARQMA---------LHANLASLV----YQSVQKKHPYASNWLER 1797

Human   431 FKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAI 495
            .:::.|.||:.::.:....|.                              |.::|..|...|||
  Fly  1798 LRKLKRLRSKLIEGLNSQQKS------------------------------GSASSGIGINASAI 1832

Human   496 G 496
            |
  Fly  1833 G 1833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAP1GAPNP_001375129.1 GoLoco <1..17 CDD:214645
Rap_GAP 211..390 CDD:396632 42/186 (23%)
gigNP_524177.1 DUF3384 40..467 CDD:288697
HEAT repeat 484..515 CDD:293787
Tuberin 566..882 CDD:281532
Rap_GAP 1617..1802 CDD:280332 47/231 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1559
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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