DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAP1B and Rala

DIOPT Version :10

Sequence 1:NP_056461.1 Gene:RAP1B / 5908 HGNCID:9857 Length:184 Species:Homo sapiens
Sequence 2:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster


Alignment Length:191 Identity:90/191 - (47%)
Similarity:135/191 - (70%) Gaps:11/191 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMR 68
            :|::::|||||||||||:||:...|||.|:||..|||||:|.:|.::..::||||||.|.:.|:|
  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 76

Human    69 DLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQN 133
            |.|.::|:||..|:|||...:|...|:.||||||||:.:.:|.:||||||||.|:|.|...:.|.
  Fly    77 DNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQL 141

Human   134 LARQWNNCAFLESSAKSKINVNEIFYDLVRQI-NRKT----PVPGKA-----RKKSSCQLL 184
            .|:|| ...::|:|||::.||:::|:||:|:| :|||    ...|:|     :::..|.||
  Fly   142 RAQQW-AVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKATSGRAKDRCKKRRLKCTLL 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAP1BNP_056461.1 Rap1 3..167 CDD:133375 82/163 (50%)
Interaction with KRIT1. /evidence=ECO:0000269|PubMed:22577140 25..67 20/41 (49%)
Effector region. /evidence=ECO:0000305 32..40 4/7 (57%)
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 82/162 (51%)

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