Protein Alignment Rnf130 and Rnf130

DIOPT Version :9

• Sequence 1: NP_001277679.1
• Gene: Rnf130 / 59044
• MGIID: 1891717
• Length: 419
• Species: Mus musculus
• Sequence 2: XP_038942740.1
• Gene: Rnf130 / 652955
• RGDID: 1562041
• Length: 439
• Species: Rattus norvegicus
• Alignment Length: 383
• Identity: 381/383 - (99%)
• Similarity: 382/383 - (99%)
• Gaps: 0/383 - (0%)

Mouse     1 MSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPGRGTPLTFRIDRGRYGLDS 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPGRGTPLTFRIDRGRYGLDS 65

Mouse    66 PKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAFHNAVAV 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 PKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAFHNAVAV 130

Mouse   131 VIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 VIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSL 195

Mouse   196 VFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPD 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 VFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPD 260

Mouse   261 FDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVA 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 FDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVA 325

Mouse   326 FDMERLTRTQAVNRRAALGDLAGDSSLGLEPLRTSGISPLPQDGELTPRTGEINIAVT 383
            |||||||||||||||:||||||.|||||||||||||||||||||||||||||||||||
  Rat   326 FDMERLTRTQAVNRRSALGDLANDSSLGLEPLRTSGISPLPQDGELTPRTGEINIAVT 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf130	NP_001277679.1	PA_GRAIL_like	40..179	CDD:239037	138/138 (100%)
		HRD1	<197..>306	CDD:227568	108/108 (100%)
		RING-H2_RNF130	262..310	CDD:319717	47/47 (100%)
		RING-H2 finger (C3H2C3-type)	264..304	CDD:319717	39/39 (100%)
Rnf130	XP_038942740.1	PA_GRAIL_like	40..179	CDD:239037	138/138 (100%)
		HRD1	<197..366	CDD:227568	166/168 (99%)
		RING-H2_RNF130	262..310	CDD:319717	47/47 (100%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	224	1.000	Domainoid score	I25142
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H41267
Inparanoid	1	1.050	843	1.000	Inparanoid score	I8431
OMA	1	1.010	-	-		QHG41430
OrthoDB	1	1.010	-	-		D119406at9347
OrthoFinder	1	1.000	-	-		FOG0000832
OrthoInspector	1	1.000	-	-		oto165787
orthoMCL	1	0.900	-	-		OOG6_110755
Panther	1	1.100	-	-	LDO	PTHR22765
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X295
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	13	12.980