Protein Alignment Rnf130 and meu34

DIOPT Version :10

• Sequence 1: NP_067515.2
• Gene: Rnf130 / 59044
• MGIID: 1891717
• Length: 419
• Species: Mus musculus
• Sequence 2: NP_593329.1
• Gene: meu34 / 2543036
• PomBaseID: SPAC3A12.03C
• Length: 309
• Species: Schizosaccharomyces pombe
• Alignment Length: 221
• Identity: 48/221 - (21%)
• Similarity: 75/221 - (33%)
• Gaps: 93/221 - (42%)

Mouse    99 PNIKQWIALLQ---RGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITEL 160
            |.|| |:...:   :|..||                 .:|:|:.:.|.:  .|.|:..:|:||
pombe   116 PYIK-WLKKRKGHAKGESTF-----------------LDNRSENQSVIV--QGQGETPSVIIT-- 158

Mouse   161 RGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTN 225
                                ...|.|    :.||..||.:|
pombe   159 --------------------YDVRRP----NLGSTSFVEMS------------------------ 175

Mouse   226 ARDRNQRRLGDAAKKAISKLTTRTVKKGDKETD-----PDFDHCAVCIESYKQNDVVRVLPCKHV 285
                          .|:|.:.......||...|     .:.|.|.:|...|..:|::|||||:||
pombe   176 --------------SALSNIYNTDASDGDSSDDSCLLEDEEDFCIICYADYAFDDILRVLPCEHV 226

Mouse   286 FHKSCVDPWLSE-HCTCPMCKLNILK 310
            ||..|:|.|::. ..:||:|..:..|
pombe   227 FHTQCIDTWMTTMKASCPLCNEDYYK 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf130	NP_067515.2	PA_GRAIL_like	40..179	CDD:239037	15/82 (18%)
		HRD1	<197..>306	CDD:227568	28/114 (25%)
		RING-H2_RNF130	262..310	CDD:319717	20/48 (42%)
meu34	NP_593329.1	RING-H2_RNF11	204..247	CDD:438131	18/42 (43%)