Protein Alignment Rnf130 and rnf130

DIOPT Version :9

• Sequence 1: NP_001277679.1
• Gene: Rnf130 / 59044
• MGIID: 1891717
• Length: 419
• Species: Mus musculus
• Sequence 2: NP_001107712.1
• Gene: rnf130 / 100124963
• XenbaseID: XB-GENE-949564
• Length: 419
• Species: Xenopus tropicalis
• Alignment Length: 372
• Identity: 281/372 - (75%)
• Similarity: 311/372 - (83%)
• Gaps: 1/372 - (0%)

Mouse    12 LAALALLTCSLWPTRADNASQEYYTALINVTVQEPGRGTPLTFRIDRGRYGLDSPKAEVRGQVLA 76
            |..|.|..||:..:.:|.|:.|.|:||:|||:|:|. ..|:..|||.|||||||||.|.:|.:|.
 Frog    13 LPILVLFPCSMVQSGSDTANMENYSALVNVTIQDPS-SNPVLLRIDGGRYGLDSPKTEAKGLLLT 76

Mouse    77 PLPIHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEP 141
            |:.|||.||.|||||||||.||||.|.||||||||||||||||.|||.|||.|||||||.||||.
 Frog    77 PVHIHGAADRLGCDPQTRFNVPPNTKHWIALLQRGNCTFKEKILRAASHNASAVVIYNNNSKEET 141

Mouse   142 VTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLM 206
            |||||.|||:|:|:||:|.||::||||:|:||||.|.||||:|...|||||||||||||||||||
 Frog   142 VTMTHQGTGEIVAIMISEARGREILSYVERNISVLMAIAVGSRNQHKNFSRGSLVFVSISFIVLM 206

Mouse   207 IISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESY 271
            ||||||||||||||||||:|||||||||||||||||.||||||||||||||||||||||||||||
 Frog   207 IISSAWLIFYFIQKIRYTSARDRNQRRLGDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESY 271

Mouse   272 KQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQA 336
            ||||:||||||||||||.|||||||||||||||||||||||||..|:|||||||||||||||:|.
 Frog   272 KQNDIVRVLPCKHVFHKVCVDPWLSEHCTCPMCKLNILKALGIAANVPCTDNVAFDMERLTRSQP 336

Mouse   337 VNRRAALGDLAGDSSLGLEPLRTSGISPLPQDGELTPRTGEINIAVT 383
            .:||:|..|...:.||.||.||:|.||..|.|.|..||||||||:||
 Frog   337 PSRRSAPNDPTEEGSLSLESLRSSRISQGPHDVEAIPRTGEINISVT 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf130	NP_001277679.1	PA_GRAIL_like	40..179	CDD:239037	99/138 (72%)
		HRD1	<197..>306	CDD:227568	104/108 (96%)
		RING-H2_RNF130	262..310	CDD:319717	45/47 (96%)
		RING-H2 finger (C3H2C3-type)	264..304	CDD:319717	37/39 (95%)
rnf130	NP_001107712.1	PA_GRAIL_like	41..179	CDD:239037	99/138 (72%)
		HRD1	<197..344	CDD:227568	134/146 (92%)
		RING_Ubox	262..310	CDD:388418	45/47 (96%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	170	1.000	Domainoid score	I18278
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H41267
Inparanoid	1	1.050	567	1.000	Inparanoid score	I6731
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0000832
OrthoInspector	1	1.000	-	-		oto185765
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X295
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	8.060