DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAF1 and PKC1

DIOPT Version :10

Sequence 1:NP_001341618.1 Gene:RAF1 / 5894 HGNCID:9829 Length:668 Species:Homo sapiens
Sequence 2:NP_009445.2 Gene:PKC1 / 852169 SGDID:S000000201 Length:1151 Species:Saccharomyces cerevisiae


Alignment Length:850 Identity:160/850 - (18%)
Similarity:280/850 - (32%) Gaps:284/850 - (33%)


- Green bases have known domain annotations that are detailed below.


Human     5 QGAWKTISNGFGFKDAVFDGSSCISPTIVQQFGYQRRASD-DGKLTDPSKTS-NTIRVFLPNKQR 67
            |..|...||..|......:..|.::.|..........|.: .|:.|..|:.| |:..|..|:.|.
Yeast   311 QQGWVNASNINGGSSLASEEGSTLTSTYSNSAIQSTSAKNVQGENTSTSQISTNSWFVLEPSGQI 375

Human    68 TVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKKARLDWNTDAASLIGEELQVDFLD 132
            .:.     :..|         :..|.|...:...||.|             .::|..:.:: |..
Yeast   376 LLT-----LGFH---------KSSQIERKQLMGGLHRH-------------GAIINRKEEI-FEQ 412

Human   133 HVPLTTHNFARKTFLKLAFCDICQKFL-LNGFRCQTCGYKFHEHCSTKVPTMCV---------DW 187
            |    .|:|.:|:|..:..|..|..|| ..||:||.|.:..|:.|.|.|.|.|:         |.
Yeast   413 H----GHHFVQKSFYNIMCCAYCGDFLRYTGFQCQDCKFLCHKKCYTNVVTKCIAKTSTDTDPDE 473

Human   188 SNIRQLL---LFPNSTIG----------------------DSG----------VPALPSLTM--- 214
            :.:...:   ..|.|..|                      :.|          ||....::|   
Yeast   474 AKLNHRIPHRFLPTSNRGTKWCCHCGYILPWGRHKVRKCSECGIMCHAQCAHLVPDFCGMSMEMA 538

Human   215 ----------RRMRESVSRMPVSSQHRYSTPHAFTFNTSSPSSEGSLSQR---------QRSTST 260
                      :|.:|...|...|:|...|...|    ..|..|...|::|         ::...|
Yeast   539 NKILKTIQDTKRNQEKKKRTVPSAQLGSSIGTA----NGSDLSPSKLAERANAPLPPQPRKHDKT 599

Human   261 PNVHMVSTTLP-------VDSRMIENNNLSASPRAWSRRFCLRGRDAIRSHSESASPSALSSSP- 317
            |:...|....|       :|.|:    :|....|....:| :...:|..:.:|.|..:|..||| 
Yeast   600 PSPQKVGRDSPTKQHDPIIDKRI----SLQTHGREKLNKF-IDENEAYLNFTEGAQQTAEFSSPE 659

Human   318 NNLSPTG-----------------WSQPKTPV-------PAQRERAPVSGTQEKNKIRPRGQRD- 357
            ..|.||.                 |......:       .||||...:...|:..:|:...:.| 
Yeast   660 KTLDPTSNRRSLGLTDLSIEHSQTWESKDDLMRDELELWKAQREEMELEIKQDSGEIQEDLEVDH 724

Human   358 -----------------------------------SSYYWEIE----ASEVMLST---------- 373
                                               :|..::||    :.||:..|          
Yeast   725 IDLETKQKLDWENKNDFREADLTIDSTHTNPFRDMNSETFQIEQDHASKEVLQETVSLAPTSTHA 789

Human   374 ---------------------------------------RIGSGSFGTVYKGKWHGD---VAVKI 396
                                                   .:|.|:||.|...|....   .|:|:
Yeast   790 SRTTDQQSPQKSQTSTSAKHKKRAAKRRKVSLDNFVLLKVLGKGNFGKVILSKSKNTDRLCAIKV 854

Human   397 LK----VVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKH---- 452
            ||    :.:...|..:|.:....:..||:|..:. |:..:.|::.:....::..|..|..|    
Yeast   855 LKKDNIIQNHDIESARAEKKVFLLATKTKHPFLTNLYCSFQTENRIYFAMEFIGGGDLMWHVQNQ 919

Human   453 -LHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 516
             |.|:..||       .|.:....:.|.|...:|:||:|..||.|.....:||.|:||.. ...|
Yeast   920 RLSVRRAKF-------YAAEVLLALKYFHDNGVIYRDLKLENILLTPEGHIKIADYGLCK-DEMW 976

Human   517 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI---- 577
            .|: :.....|:..:||||:::.|:   ::...|.:::|::||:::..:.|:|. ::.|::    
Yeast   977 YGN-RTSTFCGTPEFMAPEILKEQE---YTKAVDWWAFGVLLYQMLLCQSPFSG-DDEDEVFNAI 1036

Human   578 --------------IFMVGRGYASPDLSKLYKNCPK---------AMKRLVADCVKKVKEERPLF 619
                          |..:.:|..:.|..|.....|:         ..:.:..|.:..::.:.|..
Yeast  1037 LTDEPLYPIDMAGEIVQIFQGLLTKDPEKRLGAGPRDADEVMEEPFFRNINFDDILNLRVKPPYI 1101

Human   620 PQILS 624
            |:|.|
Yeast  1102 PEIKS 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAF1NP_001341618.1 RBD_CRAF 55..131 CDD:340655 12/76 (16%)
C1_A_C-Raf 136..187 CDD:410420 19/60 (32%)
STKc_C-Raf 356..638 CDD:271051 70/397 (18%)
PKC1NP_009445.2 HR1_PKC-like_1_fungi 1..72 CDD:212011
HR1_PKC-like_2_fungi 110..181 CDD:212010
C2_fungal_Pkc1p 211..319 CDD:176071 2/7 (29%)
C1_ScPKC1-like_rpt1 413..464 CDD:410372 20/54 (37%)
C1_ScPKC1-like_rpt2 478..536 CDD:410373 6/57 (11%)
STKc_PKC 828..1145 CDD:270722 63/291 (22%)
Blue background indicates that the domain is not in the aligned region.

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