DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAF1 and ksr

DIOPT Version :10

Sequence 1:NP_001341618.1 Gene:RAF1 / 5894 HGNCID:9829 Length:668 Species:Homo sapiens
Sequence 2:NP_524236.2 Gene:ksr / 40660 FlyBaseID:FBgn0015402 Length:966 Species:Drosophila melanogaster


Alignment Length:789 Identity:221/789 - (28%)
Similarity:333/789 - (42%) Gaps:189/789 - (23%)


- Green bases have known domain annotations that are detailed below.


Human     4 IQGAWKTISNGFGFKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTDPSKTSNTIRVFLPNKQRT 68
            ::|....::|...||      |...||:          |:::...|..|:.:.|:....||...|
  Fly   224 VKGKNSALANSTNFK------SGRQSPS----------ATEELNSTQGSQLTLTLTPSPPNSPFT 272

Human    69 VVNVRNGMS------------------LHDCLMKALKVRGLQPECCAVFRL-------LHEHKGK 108
               ..:|:|                  .|..|:....|: :..|..|..||       .|.....
  Fly   273 ---PSSGLSSSLNGTPQRSRGTPPPARKHQTLLSQSHVQ-VDGEQLARNRLPTDPSPDSHSSTSS 333

Human   109 KARLDWNTDAASLIGEELQVDFLDHVPLTTH----NFARKTFLK----LAFCDICQKFLLNGF-R 164
            ...:|.||:|:| .|....|..:...|...|    :..:..|.|    :|.|.:|||.:.:.: :
  Fly   334 DIFVDPNTNASS-GGSSSNVLMVPCSPGVGHVGMGHAIKHRFTKALGFMATCTLCQKQVFHRWMK 397

Human   165 CQTCGYKFHEHCSTKVPTMC------VD-WSNIRQ----------------LLLFPNSTIG---- 202
            |..|.|..|:.|:..||..|      || :.:|::                ..|...||:|    
  Fly   398 CTDCKYICHKSCAPHVPPSCGLPREYVDEFRHIKEQGGYASLPHVHGAAKGSPLVKKSTLGKPLH 462

Human   203 -------------DSGVPALPSLTMRRMRE--------SVSRMPVSSQHRYSTPHAFTF-NTSSP 245
                         .|..|:.|:|..:|.||        |.:.:|..|..::. |..|.| |.:..
  Fly   463 QQHGDSSSPSSSCTSSTPSSPALFQQRERELDQAGSSSSANLLPTPSLGKHQ-PSQFNFPNVTVT 526

Human   246 SSEGS-----LSQR-----------------QRSTSTPNVHM----------VSTTLPVDSRMIE 278
            ||.||     :|..                 ....|:.|.||          .||...:...::.
  Fly   527 SSGGSGGVSLISNEPVPEQFPTAPATANGGLDSLVSSSNGHMSSLIGSQTSNASTAATLTGSLVN 591

Human   279 NNNLSASPRAWSRRFCLRGRDA--------IRSHSESASPSALSSSPNNLSPTGWSQPKTPVPAQ 335
            :...:::...:.|:....|.|.        ..:|..:.|...:|.|    ........:|||...
  Fly   592 STTTTSTCSFFPRKLSTAGVDKRTPFTSEYTDTHKSNDSDKTVSLS----GSASTDSDRTPVRVD 652

Human   336 RERAPVSGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILK-- 398
            ......||...:|.|       |...|:|...:::|..|||.|.||||::..||||||||:|.  
  Fly   653 STEDGDSGQWRQNSI-------SLKEWDIPYGDLLLLERIGQGRFGTVHRALWHGDVAVKLLNED 710

Human   399 -VVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQ 461
             :.|  ....:.||:|||..:.|||.|::|||| .|....|||||..|:|::||.::|.:..||.
  Fly   711 YLQD--EHMLETFRSEVANFKNTRHENLVLFMGACMNPPYLAIVTSLCKGNTLYTYIHQRREKFA 773

Human   462 MFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT 526
            |.:.:.||:|.||||.||||:.|||:|:::.|||:..|..: |.||||.:..........:..|.
  Fly   774 MNRTLLIAQQIAQGMGYLHAREIIHKDLRTKNIFIENGKVI-ITDFGLFSSTKLLYCDMGLGVPH 837

Human   527 GSVLWMAPEVIR-MQDNNP------FSFQSDVYSYGIVLYELMTGELPYSHINNRDQ----IIFM 580
            ..:.::|||:|| :|...|      |:..|||||:|.|.|||:.||..:     :||    ||:.
  Fly   838 NWLCYLAPELIRALQPEKPRGECLEFTPYSDVYSFGTVWYELICGEFTF-----KDQPAESIIWQ 897

Human   581 VGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK--INRSASEP 643
            |||| ....|:.|...  :.:|.|:..|....||.||.|.::||   ||:| |||  :.||.|.|
  Fly   898 VGRG-MKQSLANLQSG--RDVKDLLMLCWTYEKEHRPQFARLLS---LLEH-LPKKRLARSPSHP 955

Human   644 -SLHRAAHT 651
             :|.|:|.:
  Fly   956 VNLSRSAES 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAF1NP_001341618.1 RBD_CRAF 55..131 CDD:340655 21/100 (21%)
C1_A_C-Raf 136..187 CDD:410420 18/66 (27%)
STKc_C-Raf 356..638 CDD:271051 120/298 (40%)
ksrNP_524236.2 SAM_KSR1_N 33..86 CDD:466555
SAM_KSR1 92..166 CDD:463916
C1_KSR 370..418 CDD:410362 14/47 (30%)
PK_KSR 678..946 CDD:270965 116/282 (41%)
Blue background indicates that the domain is not in the aligned region.

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