DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAF1 and mph1

DIOPT Version :10

Sequence 1:NP_001341618.1 Gene:RAF1 / 5894 HGNCID:9829 Length:668 Species:Homo sapiens
Sequence 2:NP_595150.2 Gene:mph1 / 2540060 PomBaseID:SPBC106.01 Length:678 Species:Schizosaccharomyces pombe


Alignment Length:562 Identity:120/562 - (21%)
Similarity:219/562 - (38%) Gaps:109/562 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   174 EHCSTKVPTMCVDWSNIRQLLLFPNSTIGDSGVPALP--------SLTMRRMRESVSRM----PV 226
            ||..|.:|:.....|.: .|....|....:|....||        ||::.| |..:.|:    |.
pombe   108 EHLITPLPSTNASHSEV-SLSAGVNDLNSNSEHDLLPKSVNKTPGSLSISR-RRRIGRIGLGPPK 170

Human   227 SSQHRYSTPHAFTFNTSSPSSEGSLSQRQRSTSTPNVHMVSTTL-PVDSRMIENNNLSAS----- 285
            .:::..:.|...:...:|..::..:..:.|..|..:..:.:||| |:   .:.|..|..|     
pombe   171 RAEYTLTDPSKTSDTKNSTEADEDIEMKSREVSPASNSVAATTLKPL---QLHNTPLQTSQEHPK 232

Human   286 ----PRAWSRRFCLR---GRDAIRSHSESAS-PSALSSSPNNLSPTGWSQPKTPVPAQRERAPVS 342
                |..:...|..|   ..|..|..||..| |..:...|...:    |||........:.||:.
pombe   233 PSFHPSQFESSFSPRVQFDHDVERRASELHSRPVTVFQEPQRSA----SQPYESHALSPKVAPLF 293

Human   343 GTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGD----VAVKILKVVDPT 403
            ...:...| |:.|:|......::..::.:   :|.|....||: .:..|    .|:|.:..::..
pombe   294 DNSQATPI-PKRQQDVVTVANLQFIKLGV---VGKGGSSMVYR-IFSPDNSRLYALKEVNFINAD 353

Human   404 PEQFQAFRNEVAVLRK-TRHVNILLFMGYMTKDNLAIVTQWCE-GSSLYKHLHVQETK------- 459
            ....|.::||:|:||| :.:..|:........|.|..:....| |.:...:|.::..|       
pombe   354 QTTIQGYKNEIALLRKLSGNDRIIKLYAAEVNDTLGQLNMVMECGETDLANLLMKNMKKPINLNF 418

Human   460 FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 524
            .:|:.     .|..:.:..:|.:||:|.|:|..|..|.|| .:|:.|||:|......:.:...:.
pombe   419 IRMYW-----EQMLEAVQVVHDQNIVHSDLKPANFLLVEG-NLKLIDFGIAKAIGNDTTNIHRDS 477

Human   525 PTGSVLWMAPEVIRMQDNNPFSFQ----------SDVYSYGIVLYELMTGELPYSHINNRDQIIF 579
            ..|::.:||||.  :.|.|..:..          |||:|.|.:||:::.|..|::|:.....|..
pombe   478 HIGTINYMAPEA--LTDMNAHTNSGVKLVKLGRPSDVWSLGCILYQMVYGRAPFAHLKMIQAIAA 540

Human   580 MVGRGY-------------------------ASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLF 619
            :....|                         ..|||..:       |||    |:::.:.:|...
pombe   541 IPNEQYHIHFPEVALPANAVQEKEGSLPGVTVGPDLMDV-------MKR----CLERDQRKRLTI 594

Human   620 PQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINACTLTT 661
            |::|  :....:.||......::..|..:.||.:.:...|:|
pombe   595 PELL--VHPFLNPLPSYLTPLAKKPLPVSGHTNNAHPLRLST 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAF1NP_001341618.1 RBD_CRAF 55..131 CDD:340655
C1_A_C-Raf 136..187 CDD:410420 4/12 (33%)
STKc_C-Raf 356..638 CDD:271051 70/329 (21%)
mph1NP_595150.2 PKc_Mps1 315..603 CDD:271033 67/312 (21%)
Blue background indicates that the domain is not in the aligned region.

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