DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAF1 and Raf1

DIOPT Version :9

Sequence 1:NP_001341618.1 Gene:RAF1 / 5894 HGNCID:9829 Length:668 Species:Homo sapiens
Sequence 2:NP_001343262.1 Gene:Raf1 / 110157 MGIID:97847 Length:668 Species:Mus musculus


Alignment Length:668 Identity:649/668 - (97%)
Similarity:656/668 - (98%) Gaps:0/668 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEHIQGAWKTISNGFGFKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTDPSKTSNTIRVFLPNK 65
            ||||||||||||||||.|||||||||||||||||||||||||||||||||.||||||||||||||
Mouse     1 MEHIQGAWKTISNGFGLKDAVFDGSSCISPTIVQQFGYQRRASDDGKLTDSSKTSNTIRVFLPNK 65

Human    66 QRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKKARLDWNTDAASLIGEELQVDF 130
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Mouse    66 QRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLQEHKGKKARLDWNTDAASLIGEELQVDF 130

Human   131 LDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 LDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLL 195

Human   196 FPNSTIGDSGVPALPSLTMRRMRESVSRMPVSSQHRYSTPHAFTFNTSSPSSEGSLSQRQRSTST 260
            |||||:|||||||.||..||||||||||||.||||||||||||||||||||||||||||||||||
Mouse   196 FPNSTVGDSGVPAPPSFPMRRMRESVSRMPASSQHRYSTPHAFTFNTSSPSSEGSLSQRQRSTST 260

Human   261 PNVHMVSTTLPVDSRMIENNNLSASPRAWSRRFCLRGRDAIRSHSESASPSALSSSPNNLSPTGW 325
            ||||||||||.|||||||:|:|:|||||.||||||||||||||||||||||||||||||||||||
Mouse   261 PNVHMVSTTLHVDSRMIESNSLNASPRACSRRFCLRGRDAIRSHSESASPSALSSSPNNLSPTGW 325

Human   326 SQPKTPVPAQRERAPVSGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG 390
            |||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   326 SQPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG 390

Human   391 DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHV 455
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   391 DVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHV 455

Human   456 QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   456 QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 520

Human   521 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY 585
            |||||||||||||||||||||:||||||||||||||||||||.|||||:||||||||||||||||
Mouse   521 QVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPYAHINNRDQIIFMVGRGY 585

Human   586 ASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAH 650
            ||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   586 ASPDLSRLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAH 650

Human   651 TEDINACTLTTSPRLPVF 668
            ||||||||||||||||||
Mouse   651 TEDINACTLTTSPRLPVF 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAF1NP_001341618.1 Raf_RBD 57..131 CDD:176411 72/73 (99%)
C1_1 139..187 CDD:278556 47/47 (100%)
STKc_C-Raf 356..638 CDD:271051 276/281 (98%)
Raf1NP_001343262.1 RBD_CRAF 55..131 CDD:340655 74/75 (99%)
C1_1 139..184 CDD:365894 44/44 (100%)
STKc_C-Raf 356..638 CDD:271051 276/281 (98%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83965333
Domainoid 1 1.000 512 1.000 Domainoid score I7266
eggNOG 1 0.900 - - E2759_KOG0193
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48145
Inparanoid 1 1.050 1288 1.000 Inparanoid score I3889
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG49873
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001587
OrthoInspector 1 1.000 - - oto116278
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR44329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X994
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1515.360

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