DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAD51B and RAD51

DIOPT Version :10

Sequence 1:NP_001308750.1 Gene:RAD51B / 5890 HGNCID:9822 Length:425 Species:Homo sapiens
Sequence 2:NP_011021.3 Gene:RAD51 / 856831 SGDID:S000000897 Length:400 Species:Saccharomyces cerevisiae


Alignment Length:346 Identity:95/346 - (27%)
Similarity:158/346 - (45%) Gaps:34/346 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGS----KKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMVSRACA 61
            :||    :||:..|::.....:|....:.|.:........:|:::.|:|.....:||...:|...
Yeast    77 LGSFVPIEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAKADKLLNEAARLVP 141

Human    62 PKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILAT 126
            ....||.....:||   ....|:|....||..|.|||..||:||:.|....||:|.|..:::...
Yeast   142 MGFVTAADFHMRRS---ELICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQ 203

Human   127 LPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQR 191
            :|.::||.||..:|||||..|...|||.||: ||.  .:.::.|    :.|...|....|..|:.
Yeast   204 IPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQ-RFG--LDPDDAL----NNVAYARAYNADHQLRL 261

Human   192 IESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILT 256
            :::..:.:......|:::|||.::.|.:|..  :|.|..|...||:...:|:.||::|.:.|::|
Yeast   262 LDAAAQMMSESRFSLIVVDSVMALYRTDFSG--RGELSARQMHLAKFMRALQRLADQFGVAVVVT 324

Human   257 NQITTHLSGALASQADLVSPADDLSLSEGTSGSSCVIAALGNTWSHSVNTRLILQYLDSERRQIL 321
            ||:...:.|.:|...|...|..                  ||..:||..|||..:.....:|...
Yeast   325 NQVVAQVDGGMAFNPDPKKPIG------------------GNIMAHSSTTRLGFKKGKGCQRLCK 371

Human   322 IAKSPLAPFTSFVYTIKEEGL 342
            :..||..|....|:.|.|:|:
Yeast   372 VVDSPCLPEAECVFAIYEDGV 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAD51BNP_001308750.1 Rad51B 91..327 CDD:410901 69/235 (29%)
RAD51NP_011021.3 recomb_RAD51 83..397 CDD:274048 93/340 (27%)

Return to query results.
Submit another query.