DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAD23A and CG10694

DIOPT Version :10

Sequence 1:NP_005044.1 Gene:RAD23A / 5886 HGNCID:9812 Length:363 Species:Homo sapiens
Sequence 2:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster


Alignment Length:140 Identity:27/140 - (19%)
Similarity:45/140 - (32%) Gaps:53/140 - (37%)


- Green bases have known domain annotations that are detailed below.


Human     4 LPLFFSAMLAACVFSEEQTEGITIAYKVLEVYPRSRRVLITCDIR--------EAPRPITYSLIA 60
            ||||::           :.:.:.::.:|             |.:|        .|| |.|.:.:.
  Fly   519 LPLFYT-----------EIDKVDLSVEV-------------CGVRFENPFGLASAP-PTTSTAMI 558

Human    61 SR------GVLVAKKIVRDYTPASFNINITLKSSPDLLTYSCQAASNLGTYGPSSRLQMYSELWT 119
            .|      |..|.|....|.       ::....||.::. ...|..:   |||.....:..||.:
  Fly   559 RRAFEQGWGFAVTKTFALDK-------DMVTNVSPRIVR-GVTAGQH---YGPQQGAFLNIELIS 612

Human   120 NGCEPPCGCW 129
            ..|   |..|
  Fly   613 EKC---CDYW 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAD23ANP_005044.1 rad23 3..361 CDD:273167 27/140 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..160 11/49 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..227
HIV-1 vpr binding 319..363
CG10694NP_651212.1 rad23 1..284 CDD:273167
Blue background indicates that the domain is not in the aligned region.

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