DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAD23A and CG7215

DIOPT Version :10

Sequence 1:NP_005044.1 Gene:RAD23A / 5886 HGNCID:9812 Length:363 Species:Homo sapiens
Sequence 2:NP_650680.1 Gene:CG7215 / 3772662 FlyBaseID:FBgn0038571 Length:130 Species:Drosophila melanogaster


Alignment Length:74 Identity:25/74 - (33%)
Similarity:38/74 - (51%) Gaps:7/74 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY-RIDE 68
            ||:|.|:.:...|.:.|..|:..:|.:||||....|   ..|||:..|:.|:::..|..| .|.|
  Fly     3 ITIKVLKGKDCTIEVAPTSTILEVKHQIEAELQISA---TNQKLLLLGRPLNNEQTIASYPNIKE 64

Human    69 ---KNFVVV 74
               .|.||:
  Fly    65 GTKLNLVVI 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAD23ANP_005044.1 rad23 3..361 CDD:273167 25/74 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..160
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..227
HIV-1 vpr binding 319..363
CG7215NP_650680.1 Ubl1_cv_Nsp3_N-like 1..72 CDD:475130 23/71 (32%)
Tugs 87..121 CDD:465528
Blue background indicates that the domain is not in the aligned region.

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