Sequence 1: | NP_001357926.1 | Gene: | Dlc1 / 58834 | RGDID: | 68416 | Length: | 1542 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097786.1 | Gene: | cv-c / 41749 | FlyBaseID: | FBgn0285955 | Length: | 2351 | Species: | Drosophila melanogaster |
Alignment Length: | 1564 | Identity: | 455/1564 - (29%) |
---|---|---|---|
Similarity: | 698/1564 - (44%) | Gaps: | 373/1564 - (23%) |
- Green bases have known domain annotations that are detailed below.
Rat 76 RPMGHISPEVDESDSQEGEERFLSLEASTETLVHISDEDTDSDLHLINDSQI---LPP------- 130
Rat 131 -----QRHERDSHESVKGAGSFRKTLSTMQSSQDSHNTWTMAGEAEISAAEGGE-ERKDGDTISK 189
Rat 190 SLEHCKSTSASETNEVAKVNTFQSLNAKDDITPKTQLLDSLVLVKDVTPETQLLDSAVIAQQHRK 254
Rat 255 PDFPNDDQEKNLHHVVEEDFLVAPYTDRGLPLLKADCGSCLLRPPSCPGGMSAENDLERSGFSEY 319
Rat 320 QNKSPLRVSQEGVMQCL-HVRGPVTTQETGDNQVRLRKRK------ETREDRDRTRLDSMVLLIM 377
Rat 378 KLDQLDQDIENALSAASSPSSTPTNLRRHVPDLESGSESGTESITVNQTQVNLSSESTDPSSTPA 442
Rat 443 SNSG---TKPKAMA---------------VPCIAEKETAEIEAKEACDWLRVTGFPQYAQLYEDL 489
Rat 490 LFPIDIALVKREHDFLDRDAIEALCRRLNTLNKCAVMKLEIS--PHRKRSEDSDEEEPCAISGKW 552
Rat 553 TFQRDSKRWSRLEEFDVFSPKQDPIPGSPDNSRLQSATSRESMLTDLSEHQEVSSIRSLSSTSSS 617
Rat 618 APTHVPHSGEATTPRTNSVISVCSSSHFVGNEDSFSSLPSPKELSSFSFSMKGHEKNTKSKTRSL 682
Rat 683 LKRMESLKLKGSHHSKHKAPSKLGLIISAPILQEGMDEEKLKQLNCVEISALNGNHINVPMVRKR 747
Rat 748 SVSNSTQTSSSSSQSETSSAVSTPSPVTRTRSLSTCNKRVGMYLEGFDPFSQSAFNNVTE----- 807
Rat 808 QNY--KNRESYPEDTVFYIPEDHKPGTFPKALSNGSFCPSGNSSVNWRTGSFH---GPGHLSLRR 867
Rat 868 ENSSDSPKELKRRNSSSSVSSRMSIYDNVPGSILYSSSGELADLENEDIFPELDDILYHVKGMQR 932
Rat 933 IVNQWSEKFSDEGDSDSALDSVSPCPSSPKQIHLDVDHDRRTPSDLDST-GNSLNEPEEP----- 991
Rat 992 ----------TDIPE-RRDSGVGASLTRCNRHR---LRWHSFQSSHRPSL--------------- 1027
Rat 1028 NSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGV 1092
Rat 1093 PLTVNVQRSGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNE----SAEDYVNYE 1153
Rat 1154 GQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTL 1218
Rat 1219 LYFLSDVTAAVKENQMTPTNLAVCLAPSLFH--LNTLKRE-NSSPRVMQRKQSLGKPDQKDLNEN 1280
Rat 1281 LAATQGLAHMIAECKKLF-QVPEEMSRCRNSYTEQELKPLTLEALGHLSNDQPADYRHFLQDCVD 1344
Rat 1345 GLFKEVKEKFKGWVSYPT--SEQAELSYKKVSEGPPLRLWRATIEVPAAPEEILKRLLKEQHLWD 1407
Rat 1408 VDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPRGACALLFTSVDHDRA-PVA 1471
Rat 1472 G-VRVNVLLSRYLIEPCGSGKSKLTYMCRADLRGHMPEWYTKSFGHLCAAEVVKIRDSFSN--QS 1533
Rat 1534 TESK 1537 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dlc1 | NP_001357926.1 | SAM_DLC1 | 468..527 | CDD:188990 | 32/58 (55%) |
RhoGAP_DLC1 | 1086..1304 | CDD:239840 | 111/225 (49%) | ||
SRPBCC | 1329..1532 | CDD:417480 | 88/208 (42%) | ||
cv-c | NP_001097786.1 | SAM_DLC1,2-like | 1382..1441 | CDD:188937 | 32/58 (55%) |
RhoGAP_DLC1 | 1893..2116 | CDD:239840 | 110/224 (49%) | ||
SRPBCC | 2148..2343 | CDD:301327 | 86/197 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 196 | 1.000 | Domainoid score | I3033 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2200 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001209 | |
OrthoInspector | 1 | 1.000 | - | - | otm44733 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103453 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12659 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X752 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.810 |