DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAC1 and RhoU

DIOPT Version :10

Sequence 1:NP_061485.1 Gene:RAC1 / 5879 HGNCID:9801 Length:211 Species:Homo sapiens
Sequence 2:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster


Alignment Length:212 Identity:90/212 - (42%)
Similarity:118/212 - (55%) Gaps:27/212 - (12%)


- Green bases have known domain annotations that are detailed below.


Human     3 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRL 67
            :||||:|||||||||.|::||..|.|..|:|||..|.|:|:|.|:..||:|.:.|||||:..|.|
  Fly   392 SIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPL 456

Human    68 RPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILV 132
            |.|.||.                   :||||:|||:|.|.:|..::.||.|:...  ....:|||
  Fly   457 RELCYPD-------------------SDVFLLCFSVVKPETFRAIKTKWAPKFAK--TKAALILV 500

Human   133 GTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC 197
            ||:.|||...:.:.||:......|:|.....:|..||| ||:|.|:.||..:|.|||.||...|.
  Fly   501 GTQADLRTSPNVLNKLQTNGEEAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTAIWEGLV 564

Human   198 P---PPVKK--RKRKCL 209
            |   ||...  ||..||
  Fly   565 PTTLPPTPSFWRKLFCL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAC1NP_061485.1 Rac1_like 3..195 CDD:206663 82/191 (43%)
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 82/190 (43%)

Return to query results.
Submit another query.