Protein Alignment RAB5C and rab5c

DIOPT Version :10

• Sequence 1: NP_001238968.1
• Gene: RAB5C / 5878
• HGNCID: 9785
• Length: 249
• Species: Homo sapiens
• Sequence 2: NP_958909.1
• Gene: rab5c / 386807
• ZFINID: ZDB-GENE-031118-30
• Length: 221
• Species: Danio rerio
• Alignment Length: 217
• Identity: 195/217 - (89%)
• Similarity: 200/217 - (92%)
• Gaps: 3/217 - (1%)

Human    34 MAGRGGAARPNGPA-AGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVC 97
            ||||||.||.||.| .|||||||||||||||||||||||||||||||||||||||||||||||:|
Zfish     1 MAGRGGPARTNGAAPVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLC 65

Human    98 LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVI 162
            |||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Zfish    66 LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVI 130

Human   163 ALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAP 227
            ||||||||||:||||:|||||||||||||||||||||||||||||||||||||||:|||...|:.
Zfish   131 ALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGGAGSG 195

Human   228 GRNR-GVDLQENNPASRS-QCC 247
            ||.| ||||||..|..|| |||
Zfish   196 GRARGGVDLQETAPQGRSGQCC 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB5C	NP_001238968.1	Rab5_related	54..216	CDD:206653	157/161 (98%)
rab5c	NP_958909.1	Rab5_related	22..184	CDD:206653	157/161 (98%)