Protein Alignment RAB5C and ypt5

DIOPT Version :10

• Sequence 1: NP_001238968.1
• Gene: RAB5C / 5878
• HGNCID: 9785
• Length: 249
• Species: Homo sapiens
• Sequence 2: NP_001342856.1
• Gene: ypt5 / 2542248
• PomBaseID: SPAC6F6.15
• Length: 211
• Species: Schizosaccharomyces pombe
• Alignment Length: 197
• Identity: 134/197 - (68%)
• Similarity: 155/197 - (78%)
• Gaps: 6/197 - (3%)

Human    56 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQERYHSL 119
            ||||||:||||||||||||||.||.:|:||||||||||||:.:|: |:||.|||||||||||.||
pombe    16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSL 80

Human   120 APMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLA-SKRAVEFQEAQ 183
            ||||||.|..||||||||...:..:||:|:|||||||...|||||||||.||| .:||||..:|:
pombe    81 APMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAE 145

Human   184 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQN-ATGAPGRNRGVDLQENNPASR-SQC 246
            |||.:.:|||.|||||||.||||:|.|||||||..:..| |.||.  ||||:|.|..||:: |..
pombe   146 AYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGAV--NRGVNLSEARPAAQPSGS 208

Human   247 CS 248
            ||
pombe   209 CS 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB5C	NP_001238968.1	Rab5_related	54..216	CDD:206653	117/161 (73%)
ypt5	NP_001342856.1	Rab5_related	16..178	CDD:206653	117/161 (73%)