Protein Alignment RAB5C and Rab5c

DIOPT Version :10

• Sequence 1: NP_001238968.1
• Gene: RAB5C / 5878
• HGNCID: 9785
• Length: 249
• Species: Homo sapiens
• Sequence 2: XP_036012345.1
• Gene: Rab5c / 19345
• MGIID: 105306
• Length: 280
• Species: Mus musculus
• Alignment Length: 264
• Identity: 233/264 - (88%)
• Similarity: 234/264 - (88%)
• Gaps: 18/264 - (6%)

Human     4 SWRSPSPLSASLHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKS 68
            |||.|.|||||||||.|.|....|||..|||||||||||||||||||||||||||||||||||||
Mouse    17 SWRPPFPLSASLHSTGPTPTLTGTTTEQRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKS 81

Human    69 SLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVV 133
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    82 SLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVV 146

Human   134 YDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEF------------------Q 180
            ||||||||||||||||||||||||||||||||||||||||||||||                  |
Mouse   147 YDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQPCHLPCSPPTLFLTCLSQ 211

Human   181 EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQ 245
            |||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||:|||||||
Mouse   212 EAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRTRGVDLQESNPASRSQ 276

Human   246 CCSN 249
            ||||
Mouse   277 CCSN 280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB5C	NP_001238968.1	Rab5_related	54..216	CDD:206653	161/179 (90%)
Rab5c	XP_036012345.1	Rab5_related	67..247	CDD:206653	161/179 (90%)