Protein Alignment RAB6A and rab6a

DIOPT Version :9

• Sequence 1: NP_002860.2
• Gene: RAB6A / 5870
• HGNCID: 9786
• Length: 208
• Species: Homo sapiens
• Sequence 2: NP_989315.1
• Gene: rab6a / 394940
• XenbaseID: XB-GENE-494903
• Length: 208
• Species: Xenopus tropicalis
• Alignment Length: 208
• Identity: 200/208 - (96%)
• Similarity: 204/208 - (98%)
• Gaps: 0/208 - (0%)

Human     1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQ 65
            ||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||
 Frog     1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 65

Human    66 LWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130
            |||||||||||||||||||||..||||:|||||||||||||||||||||||||||||||||||||
 Frog    66 LWDTAGQERFRSLIPSYIRDSTVAVVVFDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130

Human   131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEK 195
            |||||||||||||||||||||||||||||||||||||||||||||||||:||:||||||||||||
 Frog   131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESSQDKSREDMIDIKLEK 195

Human   196 PQEQPVSEGGCSC 208
            |.|||||||||||
 Frog   196 PPEQPVSEGGCSC 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB6A	NP_002860.2	Rab6	14..174	CDD:206654	155/159 (97%)
		Effector region. /evidence=ECO:0000250	42..50		7/7 (100%)
rab6a	NP_989315.1	Rab6	14..174	CDD:206654	155/159 (97%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	310	1.000	Domainoid score	I8880
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	404	1.000	Inparanoid score	I9037
NCBI	1	1.000	-	-
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1277051at2759
OrthoFinder	1	1.000	-	-		FOG0000767
OrthoInspector	1	1.000	-	-		oto151616
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X452
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	8.060