DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB5A and rab5a

DIOPT Version :10

Sequence 1:NP_004153.2 Gene:RAB5A / 5868 HGNCID:9783 Length:215 Species:Homo sapiens
Sequence 2:NP_001008068.1 Gene:rab5a / 493430 XenbaseID:XB-GENE-482011 Length:216 Species:Xenopus tropicalis


Alignment Length:216 Identity:200/216 - (92%)
Similarity:208/216 - (96%) Gaps:1/216 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASR-GATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCL 64
            ||:| |||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog     1 MANRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCL 65

Human    65 DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIA 129
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog    66 DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIA 130

Human   130 LSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSA 194
            |||||||||:||||||||||:|||||||||||||||||:|||||||||||||||.|||..|:|:.
 Frog   131 LSGNKADLASKRAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTEPQAGGSNTI 195

Human   195 RGRGVDLTEPTQPTRNQCCSN 215
            |||||||||..|||::|||||
 Frog   196 RGRGVDLTETAQPTKSQCCSN 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB5ANP_004153.2 Rab5_related 20..182 CDD:206653 158/161 (98%)
Switch 1. /evidence=ECO:0000269|PubMed:20534488, ECO:0007744|PDB:3MJH 44..56 11/11 (100%)
Switch 2. /evidence=ECO:0000269|PubMed:20534488, ECO:0007744|PDB:3MJH 77..93 15/15 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..215 23/33 (70%)
rab5aNP_001008068.1 Rab5_related 21..183 CDD:206653 158/161 (98%)

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