DRSC/TRiP Functional Genomics Resources

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Protein Alignment KMT2C and SET1

DIOPT Version :10

Sequence 1:NP_733751.2 Gene:KMT2C / 58508 HGNCID:13726 Length:4911 Species:Homo sapiens
Sequence 2:NP_011987.1 Gene:SET1 / 856519 SGDID:S000001161 Length:1080 Species:Saccharomyces cerevisiae


Alignment Length:1276 Identity:254/1276 - (19%)
Similarity:414/1276 - (32%) Gaps:463/1276 - (36%)


- Green bases have known domain annotations that are detailed below.


Human  3838 PKTDGGSETKKQRSKRTQRTGEKAAPRSKKRKKDEEEKQAMYSSTDTFTHLKQQNNLSNP----P 3898
            |.:...:.|::..:....::|...     .:|.|...::.|  |...:::....|.|::.    |
Yeast    66 PHSSNNASTRQYYATNNSQSGPYV-----NKKSDISSRRGM--SQSRYSNSNVHNTLASSSGSLP 123

Human  3899 TPPASLPPTPPPMACQ------------------------KMANGFATTEELAGKAGVLVSHEVT 3939
            |..|.|....||...:                        ||.:..||.:|.:.     ..:.|.
Yeast   124 TESALLLQQRPPSVLRYNTDNLKSKFHYFDPIKGEFFNKDKMLSWKATDKEFSE-----TGYYVV 183

Human  3940 KTLGPKPFQLPFRPQDDLLARALAQGPKTVDVPASLPTPPHNNQEELRIQDHCGDRDTPDSFVPS 4004
            |.|....|:...:                           |.:.|                 :.:
Yeast   184 KELQDGQFKFKIK---------------------------HRHPE-----------------IKA 204

Human  4005 SSPESVVGVEVSRYPDLSLVKEEPPEPVPSPIIPILPSTAGKSSESR--RNDIKTEPGTLYFASP 4067
            |.|.:..|:                            .|:||.:..|  ||.:...|...|....
Yeast   205 SDPRNENGI----------------------------MTSGKVATHRKCRNSLILLPRISYDRYS 241

Human  4068 FGPSPNGPRSGLISVAITLHP------TAAENIS--SVVAAFSDLLHVRIPNSYEVSSAPDVPSM 4124
            .||.|        |..|.::|      |..::||  :....:.::.|      :|..:.|     
Yeast   242 LGPPP--------SCEIVVYPAQDSTTTNIQDISIKNYFKKYGEISH------FEAFNDP----- 287

Human  4125 GLVSSHRINPGLEYRQHLLLRGPPPGSANPPRLVSSYRLKQPNVPFPPTSNG--LSGYKD----S 4183
                    |..|....:|:......|..|.....:...:::..      |:|  :.|:|.    :
Yeast   288 --------NSALPLHVYLIKYASSDGKINDAAKAAFSAVRKHE------SSGCFIMGFKFEVILN 338

Human  4184 SHGIAESAALRPQWCCHCKVVILGSGVRKS--------------FKDLTLLNK-------DSRES 4227
            .|.|..:...:.......|:..|...::|:              .||:||..:       .|..|
Yeast   339 KHSILNNIISKFVEINVKKLQKLQENLKKAKEKEAENEKAKELQGKDITLPKEPKVDTLSHSSGS 403

Human  4228 TKRVEKDIVFCSNN-----------------------------C----------FILYSSTAQAK 4253
            .||:..|::...||                             |          :|:::..|.|:
Yeast   404 EKRIPYDLLGVVNNRPVLHVSKIFVAKHRFCVEDFKYKLRGYRCAKFIDHPTGIYIIFNDIAHAQ 468

Human  4254 NSENKESIPSLPQSPMRETPSK-AFHQYSNNISTLDVHCLPQLPEK--------ASPPASPPIAF 4309
            ...|.||......|..|..|.. .||.           .||:...:        :|...:.||.:
Yeast   469 TCSNAESGNLTIMSRSRRIPILIKFHL-----------ILPRFQNRTRFNKSSSSSNSTNVPIKY 522

Human  4310 PPAFEAAQVEAKPDELKVTVKLKPRLRAVHGGFEDCRPLNKKWRGMKWKKWSIHIVIPKGTFKPP 4374
                     |:|.:.::.|.|            :..:.|.|          ::|:.|.|....|.
Yeast   523 ---------ESKEEFIEATAK------------QILKDLEK----------TLHVDIKKRLIGPT 556

Human  4375 CEDEID-----EFLKK-----------LGTSLKPDPVPKDYRKCCFCHEEGD------GLTDGPA 4417
            ..|.:|     |.|.|           :.:.:..|.:.:        .||..      ||..|.|
Yeast   557 VFDALDHANFPELLAKRELKEKEKRQQIASKIAEDELKR--------KEEAKRDFDLFGLYGGYA 613

Human  4418 RLLNLDLDLWVHLNCALWSTEVYETQAGALINVELALRRGLQ-MKCVFCHKTGATSGCHRFRCTN 4481
            :....:|..  |.:.||..|.:...:          |..|:: |..:...:|.:           
Yeast   614 KSNKRNLKR--HNSLALDHTSLKRKK----------LSNGIKPMAHLLNEETDS----------- 655

Human  4482 IYHFTCAIKAQCMFFKDKTMLCPMHKPKGI------HEQELSYFAVFRRVYVQRDEVRQIASIVQ 4540
                           |:.|.|    ..:||      |::|              ||....:|..:
Yeast   656 ---------------KETTPL----NDEGITRVSKEHDEE--------------DENMTSSSSEE 687

Human  4541 RGER--DHTFRVGSL-------IFHTIGQLLPQQ--------MQAFHSPKAL-FPVGYEASRLYW 4587
            ..|.  |..|:..|.       ..|.|..|:|.|        ..:.:.|.|. .|     ..:|.
Yeast   688 EEEEAPDKKFKSESEPTTPESDHLHGIKPLVPDQNGSSDVLDASSMYKPTATEIP-----EPVYP 747

Human  4588 STRYANRRCRYLCSIE----EKDGRPVFVIRIVEQGHEDLVLSDISPK---GVWD---KILEPVA 4642
            ...|..:..:.|.|::    .||...:.:::.:...:...|..:.|..   .:|.   |:||   
Yeast   748 PEEYDLKYSQTLSSMDLQNAIKDEEDMLILKQLLSTYTPTVTPETSAALEYKIWQSRRKVLE--- 809

Human  4643 CVRKKSEMLQ------LFPAYLKGEDLFGLTVSAVARIAESLPGVEACENYTFRYGRNPLMELPL 4701
              .:|:...|      ||.:.|:....|  ......:||:.|.     .||.....|   :..||
Yeast   810 --EEKASDWQIELNGTLFDSELQPGSSF--KAEGFRKIADKLK-----INYLPHRRR---VHQPL 862

Human  4702 -AVN---------PTGCAR-----SEPKMSAHVKRFVLRPHTLNST----STSKSFQSTVTGELN 4747
             .||         |..|.|     .||..|.        |..::|:    ::::.||..:..:  
Yeast   863 NTVNIHNERNEYTPELCQREESSNKEPSDSV--------PQEVSSSRDNRASNRRFQQDIEAQ-- 917

Human  4748 APYSKQFVHSKS-----SQYRKMKTEWKSNVYLARSRIQGLGLYAARDIEKHTMVIEYIGTIIRN 4807
                |..:.::|     :|..|.    |..|..|||.|...||||...|....|:|||:|..||.
Yeast   918 ----KAAIGTESELLSLNQLNKR----KKPVMFARSAIHNWGLYALDSIAAKEMIIEYVGERIRQ 974

Human  4808 EVANRKEKLYESQNRG-VYMFRMDNDHVIDATLTGGPARYINHSCAPNCVAEVVTFERGHKIIIS 4871
            .||..:||.|.....| .|:||:|.:.|||||..||.||:|||.|.|||.|:::......:|:|.
Yeast   975 PVAEMREKRYLKNGIGSSYLFRVDENTVIDATKKGGIARFINHCCDPNCTAKIIKVGGRRRIVIY 1039

Human  4872 SSRRIQKGEELCYDYKFDFE-DDQHKIPCHCGAVNCRKWMN 4911
            :.|.|...|||.|||||:.| ||:.::||.|||.||:.::|
Yeast  1040 ALRDIAASEELTYDYKFEREKDDEERLPCLCGAPNCKGFLN 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KMT2CNP_733751.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..101
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..203
ePHD1_KMT2C 247..330 CDD:277166
PHD1_KMT2C_like 343..388 CDD:276984
PHD2_KMT2C 390..435 CDD:277069
PHD3_KMT2C 466..517 CDD:276986
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 721..742
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 763..798
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 828..864
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 885..912
PHD4_KMT2C 952..1008 CDD:277071
PHD5_KMT2C_like 1009..1055 CDD:276988
RanBP2-type Zn finger 1084..1106 CDD:275375
PHD6_KMT2C 1086..1136 CDD:277073
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1215..1324
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1406..1431
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1458..1485
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1604..1630
HMG-box_KMT2C 1633..1713 CDD:438835
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1709..2448
PHA03247 <1876..2353 CDD:223021
Atrophin-1 2219..>2547 CDD:460830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2589..2694
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2793..2887
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2925..2954
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2989..3029
TPH <3176..>3272 CDD:464007
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3205..3241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3353..3409
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3527..3583
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3596..3919 17/108 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4024..4053 4/30 (13%)
ePHD2_KMT2C 4402..4506 CDD:277167 18/110 (16%)
FYRN 4551..4602 CDD:461787 12/66 (18%)
FYRC 4610..4697 CDD:197781 18/98 (18%)
WDR5 interaction motif (WIN). /evidence=ECO:0000269|PubMed:22266653, ECO:0000269|PubMed:22665483 4707..4712 2/9 (22%)
SET_KMT2C_2D 4758..4910 CDD:380948 70/158 (44%)
SET1NP_011987.1 AF-4 <11..>136 CDD:461550 14/76 (18%)
RRM_scSet1p_like 246..360 CDD:409743 22/146 (15%)
SET_assoc 422..486 CDD:432058 8/63 (13%)
N-SET 763..932 CDD:463344 36/197 (18%)
SET_SET1 926..1076 CDD:380998 68/153 (44%)
Blue background indicates that the domain is not in the aligned region.

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