DRSC/TRiP Functional Genomics Resources

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Protein Alignment JAM2 and hbs

DIOPT Version :9

Sequence 1:NP_001257337.1 Gene:JAM2 / 58494 HGNCID:14686 Length:312 Species:Homo sapiens
Sequence 2:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster


Alignment Length:207 Identity:53/207 - (25%)
Similarity:91/207 - (43%) Gaps:43/207 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    32 PKDQQVVTAVEYQEAILACKTPKKTVSSRLEWKKLGRSVSFVYYQQTLQGDFKNRAEMID----- 91
            |.|.|:   :|..:.:|.|:...:  :.:::|.|.|.::.|   ...:.| |...:.::|     
  Fly    45 PHDLQI---LEGTDTLLRCEVSNR--AGKVQWTKDGFALGF---SAVIPG-FPRYSVLVDAKQNA 100

Human    92 FNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPSSALSGTV------ 150
            :|::|||.|..|..:|:|:|...:  |.........|.::.||:  |..:...|.:..|      
  Fly   101 YNLQIKNATLEDDAEYQCQVGPAA--GNPAIRANAKLSIVAAPS--SIVIEGYARNARVEVEERQ 161

Human   151 -VELRCQDKEGNPAPEYTWFKDGIRLLENPRLGSQSTNSSYTMNTKTGTLQFNTVSKL------- 207
             :.|.|..:..|||.|..||:..:.:         ||....|:| :|...:|.|.|.|       
  Fly   162 NLTLHCIAENANPAAEIVWFQGEVPV---------STAPIVTVN-QTAPKRFTTSSTLHLQPRAE 216

Human   208 -DTGEYSCEARN 218
             |..|:|||||:
  Fly   217 DDYKEFSCEARH 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JAM2NP_001257337.1 IG_like 35..130 CDD:214653 22/99 (22%)
Ig 151..225 CDD:319273 24/76 (32%)
hbsNP_001286439.1 Ig 44..122 CDD:299845 22/85 (26%)
IG_like 45..137 CDD:214653 24/102 (24%)
Ig 153..231 CDD:299845 25/86 (29%)
IG_like 258..342 CDD:214653
Ig 266..327 CDD:299845
IG_like 357..>414 CDD:214653
Ig 360..427 CDD:299845
Ig <468..526 CDD:299845
I-set 547..633 CDD:254352
Ig 556..631 CDD:299845
I-set 644..735 CDD:254352
IGc2 668..725 CDD:197706
IG_like 751..829 CDD:214653
IGc2 753..815 CDD:197706
Ig 852..928 CDD:143165
FN3 935..1017 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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