DRSC/TRiP Functional Genomics Resources

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Protein Alignment JAM2 and DIP-eta

DIOPT Version :9

Sequence 1:NP_001257337.1 Gene:JAM2 / 58494 HGNCID:14686 Length:312 Species:Homo sapiens
Sequence 2:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster


Alignment Length:214 Identity:52/214 - (24%)
Similarity:87/214 - (40%) Gaps:55/214 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    29 FSAPKDQQVV--TAVEYQEAILACKT----PKKTVSSRLEWKKLGRSVSFVYYQQTLQGDF--KN 85
            ||:|    :|  ||...::|.|.|..    |.|....|::.:.:          .|:|...  ||
  Fly    45 FSSP----IVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTI----------LTIQNHVITKN 95

Human    86 R------AEMIDFNIRIKNVTRSDAGKYRCEVSA---PSEQGQNLEEDTVTLEVLVAPAVPSCEV 141
            :      :|...:.:|||::..||.|.|.|:::.   .|:.|.        |:|:|.|.:  .:.
  Fly    96 QRIGIANSEHKTWTMRIKDIKESDKGWYMCQINTDPMKSQMGY--------LDVVVPPDI--LDY 150

Human   142 PSS----ALSGTVVELRCQDKEGNPAPEYTWFKD-GIRLLENPRLGSQSTNSSYTMNTKTGTLQF 201
            |:|    ...|:.|.|:|. ..|:|.|..||.:: |:.:        :.......|:.:...|..
  Fly   151 PTSTDMVVREGSNVTLKCA-ATGSPEPTITWRRESGVPI--------ELATGEEVMSIEGTDLVI 206

Human   202 NTVSKLDTGEYSCEARNSV 220
            ..|.:...|.|.|.|.|.|
  Fly   207 PNVRRHHMGAYLCIASNGV 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JAM2NP_001257337.1 IG_like 35..130 CDD:214653 25/111 (23%)
Ig 151..225 CDD:319273 18/71 (25%)
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 24/107 (22%)
IG_like 51..137 CDD:214653 22/95 (23%)
IG_like 153..237 CDD:214653 20/82 (24%)
Ig 161..224 CDD:299845 17/71 (24%)
IG_like 252..335 CDD:214653
Ig 258..333 CDD:143165
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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