DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NECTIN1 and Fas3

DIOPT Version :9

Sequence 1:NP_002846.3 Gene:NECTIN1 / 5818 HGNCID:9706 Length:517 Species:Homo sapiens
Sequence 2:NP_001097174.1 Gene:Fas3 / 35097 FlyBaseID:FBgn0000636 Length:577 Species:Drosophila melanogaster


Alignment Length:553 Identity:114/553 - (20%)
Similarity:189/553 - (34%) Gaps:148/553 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    47 VVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLR---------- 101
            :|..|     |.::....:||.:.  ..:.|.|:.|......:|..|...:.:.|          
  Fly     4 IVFIC-----LAAILTDALTWAQV--NVEPNTALLNEGDRTELLCRYGRSINYCRIEIPGEQKVL 61

Human   102 ---------PSFT---------DGTIRLSRLELEDEGVYICEFATFPTGNRES-QLNLTVMAKPT 147
                     |.||         ...:.:.|::..:.|...|....  .|...| .::|.|..:|.
  Fly    62 NLSPEWSKTPGFTYFGAGLTAGQCGVSIERVKASNNGQVKCSLGV--EGEELSGTIDLVVALRPQ 124

Human   148 NWI--------------EGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSW------ETRLKGE 192
            ..|              |||:  .||:           |:..:|:||:.:||      ..:....
  Fly   125 QPIIELLSRPNREGYFNEGTE--FRAR-----------CSVRDGRPPANISWYIDNMPANKRTTP 176

Human   193 AEYQEIRNPNGTV-TVISRYRLVPSREAHQQSLACIVNYHMDRFKESL-------TLNVQY---- 245
            .|.....|.|..: |.:...:...|.|...:.|.|..::..||  ||:       .:||:|    
  Fly   177 LEVMSSTNDNVELSTSVQEIQWHLSPEDSNRKLVCRSHHQTDR--ESVPPQEAAYIINVRYAPVH 239

Human   246 EPEVTIEGFDGNWYLQRMD-VKLTCKADANPPATEYHWTTLNGSL--------------PK--GV 293
            :|:..:.|.    ||:... |.:|.:|...|   :..| |::|::              |:  |.
  Fly   240 QPDAAVYGL----YLEHTAIVNITIRASPQP---KIEW-TIDGAIVGQGRTDGRYSAYEPQYLGN 296

Human   294 EAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAGPVPTAIIG 358
            :..|.||...|.........|...|:|.:|....||.::.:..|.:.|          :..|.|.
  Fly   297 DEYNVTLAIAGLTLEDTTKIYNLRASNELGLTDYQVRISSSSKPPSSS----------LDVAAIV 351

Human   359 GVAGSILLVLIVVGGIVVALRRRRHTFKGDYSTKKHVYGNGYSK---AGIPQHHPPMAQNLQYPD 420
            |:..::.::::||..||.|....|..| |..|.|.........|   .|..|:|......|:.|:
  Fly   352 GIVVAVAVLVLVVLLIVFARATGRWCF-GGKSIKTPTNETQIDKQLELGAQQNHGQNVALLETPN 415

Human   421 DSDDEKKAGPLGGSSYEEEEEEEEGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGYGDRT 485
            ..       .|.|:|...|......|.|.:.::......:|||....|.|..|:..         
  Fly   416 GI-------TLLGASKLREVNGNGNGNGQQDRLSVERRHHDEDDSFEYGTDRESSV--------- 464

Human   486 LGYQYDPEQLDLAENMVSQ----NDGSFISKKE 514
                |:|....|...::||    |..|..|.|:
  Fly   465 ----YNPTTRPLKSILMSQAAGRNSRSSASDKD 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NECTIN1NP_002846.3 Ig1_Nectin-1_like 45..143 CDD:143294 20/124 (16%)
Ig2_Nectin-1_like 146..243 CDD:143298 25/124 (20%)
Ig 265..330 CDD:319273 18/80 (23%)
Interaction with FGFR. /evidence=ECO:0000250 282..299 6/32 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..488 18/91 (20%)
Fas3NP_001097174.1 C2-set_2 141..221 CDD:285423 21/94 (22%)
Ig_TrkABC_d4 235..>333 CDD:143173 23/105 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149333
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28Q44
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.830

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