| Sequence 1: | NP_002846.3 | Gene: | NECTIN1 / 5818 | HGNCID: | 9706 | Length: | 517 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001093946.1 | Gene: | Nectin1 / 192183 | RGDID: | 620791 | Length: | 515 | Species: | Rattus norvegicus |
| Alignment Length: | 517 | Identity: | 490/517 - (94%) |
|---|---|---|---|
| Similarity: | 508/517 - (98%) | Gaps: | 2/517 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MARMGLAGAAGRWWGLALGLTAFFLPGVHSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQV 65
Human 66 TWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFP 130
Human 131 TGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEY 195
Human 196 QEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYL 260
Human 261 QRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTR 325
Human 326 SGQVEVNITEFPYTPSPPEHGRRAGPVPTAIIGGVAGSILLVLIVVGGIVVALRRRRHTFKGDYS 390
Human 391 TKKHVYGNGYSKAGIPQHHPPMAQNLQYPDDSDDEKKAGPLGGSSYEEEEEEEEGGGGGERKVGG 455
Human 456 PHPKYDEDAKRPYFTVDEAEARQDGYGDRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV 517 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NECTIN1 | NP_002846.3 | Ig1_Nectin-1_like | 45..143 | CDD:143294 | 85/97 (88%) |
| Ig2_Nectin-1_like | 146..243 | CDD:143298 | 92/96 (96%) | ||
| Ig | 265..330 | CDD:319273 | 63/64 (98%) | ||
| Interaction with FGFR. /evidence=ECO:0000250 | 282..299 | 16/16 (100%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 399..488 | 87/88 (99%) | |||
| Nectin1 | NP_001093946.1 | IgV_1_Nectin-1_like | 31..143 | CDD:409469 | 99/111 (89%) |
| Ig strand B | 47..51 | CDD:409469 | 2/3 (67%) | ||
| Ig strand C | 64..68 | CDD:409469 | 3/3 (100%) | ||
| Ig strand E | 107..111 | CDD:409469 | 3/3 (100%) | ||
| Ig strand F | 121..126 | CDD:409469 | 3/4 (75%) | ||
| Ig strand G | 135..138 | CDD:409469 | 2/2 (100%) | ||
| IgC1_2_Nectin-1_like | 146..243 | CDD:143298 | 92/96 (96%) | ||
| Ig strand B | 168..172 | CDD:143298 | 3/3 (100%) | ||
| Ig strand C | 182..186 | CDD:143298 | 3/3 (100%) | ||
| Ig strand E | 209..213 | CDD:143298 | 3/3 (100%) | ||
| Ig strand F | 223..228 | CDD:143298 | 4/4 (100%) | ||
| Ig strand G | 236..239 | CDD:143298 | 1/2 (50%) | ||
| Ig | 247..333 | CDD:416386 | 83/85 (98%) | ||
| Ig strand A | 247..253 | CDD:409353 | 5/5 (100%) | ||
| Ig strand B | 265..269 | CDD:409353 | 3/3 (100%) | ||
| Ig strand C | 279..284 | CDD:409353 | 4/4 (100%) | ||
| Ig strand C' | 286..289 | CDD:409353 | 2/2 (100%) | ||
| Ig strand D | 292..297 | CDD:409353 | 4/4 (100%) | ||
| Ig strand E | 298..305 | CDD:409353 | 5/6 (83%) | ||
| Ig strand F | 310..320 | CDD:409353 | 9/9 (100%) | ||
| Ig strand G | 323..333 | CDD:409353 | 9/9 (100%) | ||
| EphA2_TM | 355..>401 | CDD:405290 | 43/45 (96%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83691161 | |
| Domainoid | 1 | 1.000 | 369 | 1.000 | Domainoid score | I11957 |
| eggNOG | 1 | 0.900 | - | - | E1_28Q44 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H2138 | |
| Inparanoid | 1 | 1.050 | 1017 | 1.000 | Inparanoid score | I5316 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG40538 | |
| OrthoDB | 1 | 1.010 | - | - | D119167at32523 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0009281 | |
| OrthoInspector | 1 | 1.000 | - | - | oto128641 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_117425 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23277 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X243 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 17 | 17.270 | |||||