| Sequence 1: | NP_002846.3 | Gene: | NECTIN1 / 5818 | HGNCID: | 9706 | Length: | 517 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001024582.1 | Gene: | him-4 / 181187 | WormBaseID: | WBGene00001863 | Length: | 5198 | Species: | Caenorhabditis elegans |
| Alignment Length: | 390 | Identity: | 93/390 - (23%) |
|---|---|---|---|
| Similarity: | 136/390 - (34%) | Gaps: | 99/390 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Human 31 QVVQVNDSMYGFIGTDVVLHCS-FANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYR 94
Human 95 ERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRA 159
Human 160 KKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNP-----NGTVTVISRYRLVPSREA 219
Human 220 HQQSLACIVNYHMDRFKE------SLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPAT 278
Human 279 EYHWTTLNGSLPKGVEAQNRTLFFKGPINYSL------AGTYICEATNPIGTRSGQVEVNITEFP 337
Human 338 YTPSPPEHGRRAGPVPTAIIGGVAGSILLVLIVVGG--IVVALRR--------RRHTFKGDYSTK 392
Human 393 392 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NECTIN1 | NP_002846.3 | Ig1_Nectin-1_like | 45..143 | CDD:143294 | 21/98 (21%) |
| Ig2_Nectin-1_like | 146..243 | CDD:143298 | 24/107 (22%) | ||
| Ig | 265..330 | CDD:319273 | 21/70 (30%) | ||
| Interaction with FGFR. /evidence=ECO:0000250 | 282..299 | 5/16 (31%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 399..488 | ||||
| him-4 | NP_001024582.1 | IG_like | 442..515 | CDD:214653 | |
| IG | 527..605 | CDD:214652 | |||
| Ig | 628..694 | CDD:319273 | |||
| I-set | 702..789 | CDD:369462 | |||
| I-set | 793..881 | CDD:369462 | |||
| Ig | 899..974 | CDD:386229 | |||
| I-set | 1012..1081 | CDD:369462 | |||
| Ig | 1109..1172 | CDD:319273 | |||
| Ig | 1196..1263 | CDD:319273 | |||
| IG_like | 1277..1358 | CDD:214653 | |||
| I-set | 1373..1450 | CDD:369462 | |||
| Ig | 1474..1544 | CDD:386229 | |||
| IGc2 | 1563..1628 | CDD:197706 | |||
| Ig | 1651..1732 | CDD:386229 | |||
| Ig | 1755..1818 | CDD:319273 | |||
| Ig | 1839..1912 | CDD:386229 | |||
| Ig | 1930..2002 | CDD:386229 | |||
| IG_like | 2014..2095 | CDD:214653 | |||
| Ig | 2094..2182 | CDD:386229 | |||
| Ig | 2190..2283 | CDD:386229 | |||
| I-set | 2296..2380 | CDD:369462 | |||
| Ig | 2384..2471 | CDD:386229 | |||
| IGc2 | 2492..2556 | CDD:197706 | |||
| Ig | 2580..2654 | CDD:386229 | |||
| Ig | 2686..2753 | CDD:319273 | |||
| IG_like | 2768..2850 | CDD:214653 | |||
| I-set | 2854..2939 | CDD:369462 | |||
| IG_like | 2951..3031 | CDD:214653 | |||
| I-set | 3046..3116 | CDD:369462 | |||
| I-set | 3127..3213 | CDD:369462 | 25/111 (23%) | ||
| Ig | 3217..3292 | CDD:386229 | 21/88 (24%) | ||
| I-set | 3300..3386 | CDD:369462 | 26/106 (25%) | ||
| I-set | 3396..3472 | CDD:369462 | 15/60 (25%) | ||
| I-set | 3481..3569 | CDD:369462 | |||
| I-set | 3591..3663 | CDD:369462 | |||
| Ig | 3667..3762 | CDD:386229 | |||
| Ig | 3775..3848 | CDD:386229 | |||
| Ig | 3859..3947 | CDD:386229 | |||
| IGc2 | 3968..4031 | CDD:197706 | |||
| Ig_3 | 4045..4119 | CDD:372822 | |||
| Ig_3 | 4136..4210 | CDD:372822 | |||
| Ig | <4262..4314 | CDD:386229 | |||
| Ig | 4318..4406 | CDD:386229 | |||
| IG_like | 4418..4496 | CDD:214653 | |||
| I-set | 4570..4654 | CDD:369462 | |||
| I-set | 4752..4836 | CDD:369462 | |||
| EGF_CA | 4996..5027 | CDD:238011 | |||
| EGF_CA | 5034..5076 | CDD:214542 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR23277 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.010 | |||||