| Sequence 1: | NP_002846.3 | Gene: | NECTIN1 / 5818 | HGNCID: | 9706 | Length: | 517 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001123159.1 | Gene: | syg-1 / 180555 | WormBaseID: | WBGene00006365 | Length: | 730 | Species: | Caenorhabditis elegans |
| Alignment Length: | 390 | Identity: | 78/390 - (20%) |
|---|---|---|---|
| Similarity: | 135/390 - (34%) | Gaps: | 107/390 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Human 12 RW--WGLALGLTAFFLPGVHSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGS 74
Human 75 KQNVAIYNPSMGVSVLAP------YRERVEFLRPSFTDG--TIRLSRLELEDEGVYICEFATFPT 131
Human 132 GNR--ESQLNLTVMAKPT-NWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSW-------- 185
Human 186 --------ETR-------LKGEAEYQEI-----------------RNPNGTVTVISRYRLVPSRE 218
Human 219 AHQQSLACIVNYHM---DRFK-ESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANP-PAT 278
Human 279 EYHWTTLNGSLPK----------GVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNI 333
Human 334 333 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NECTIN1 | NP_002846.3 | Ig1_Nectin-1_like | 45..143 | CDD:143294 | 19/107 (18%) |
| Ig2_Nectin-1_like | 146..243 | CDD:143298 | 28/141 (20%) | ||
| Ig | 265..330 | CDD:319273 | 20/75 (27%) | ||
| Interaction with FGFR. /evidence=ECO:0000250 | 282..299 | 5/26 (19%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 399..488 | ||||
| syg-1 | NP_001123159.1 | I-set | 24..124 | CDD:254352 | 20/120 (17%) |
| Ig | 30..124 | CDD:299845 | 19/114 (17%) | ||
| Ig | <151..265 | CDD:299845 | 21/114 (18%) | ||
| Ig_2 | 276..353 | CDD:290606 | 20/90 (22%) | ||
| IG_like | 283..353 | CDD:214653 | 20/83 (24%) | ||
| IG_like | 363..427 | CDD:214653 | |||
| Ig_2 | 368..438 | CDD:290606 | |||
| Ig | 440..528 | CDD:299845 | |||
| IG_like | 450..535 | CDD:214653 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X243 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||