DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPRR and Ptp52F

DIOPT Version :10

Sequence 1:NP_002840.2 Gene:PTPRR / 5801 HGNCID:9680 Length:657 Species:Homo sapiens
Sequence 2:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster


Alignment Length:278 Identity:97/278 - (34%)
Similarity:145/278 - (52%) Gaps:40/278 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   387 VASSHLLQSEFMEIPMNFVD--PKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINA 449
            ||....|..||.||.:..::  ....::..|  ||||..|.|...:||.|   ::....|.||||
  Fly  1095 VAKPEKLAREFKEITVVALELSYSASELGCH--KNRYADIFPYDKNRVIL---DIDAEGSDYINA 1154

Human   450 NYIRGYSGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNE-KCVLYWP-EKRG-- 510
            ::|.|:: ::|.:||||||...:|.|||:|:.|.:..|||.:|:.:|.|. ||..|:| ..||  
  Fly  1155 SFIDGHT-RKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVRGLT 1218

Human   511 ----------IYGKVEVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLL 565
                      :|.:.|:.|:.    |.|.::..|:          ||::..||||..|:....|:
  Fly  1219 VTIKSKEVLELYDRTELTVVH----DKYGLKEKVI----------HYYFKKWPDHGVPEDPMHLI 1269

Human   566 QLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGM 630
            ..:..|:.::..|.  .|:|||||||:||||.||...:..|:||.|..::....|.:||..|..|
  Fly  1270 MFVKKVKAEKRPSY--SPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKM 1332

Human   631 VQTSEQYEFVHHALCLYE 648
            |||.:||.|::  .|.||
  Fly  1333 VQTQQQYTFLY--ACTYE 1348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPRRNP_002840.2 R-PTPc-R 417..642 CDD:350459 86/238 (36%)
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 92/268 (34%)
Blue background indicates that the domain is not in the aligned region.

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