DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPRR and Lar

DIOPT Version :10

Sequence 1:NP_002840.2 Gene:PTPRR / 5801 HGNCID:9680 Length:657 Species:Homo sapiens
Sequence 2:NP_001260594.1 Gene:Lar / 35259 FlyBaseID:FBgn0000464 Length:2032 Species:Drosophila melanogaster


Alignment Length:447 Identity:138/447 - (30%)
Similarity:195/447 - (43%) Gaps:95/447 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   208 PEKNVLQGQHEADKIWSKEGFYAVVIFLSIFVIIV-TCLMILYRLKERFQLSLRQDKEKNQEIHL 271
            ||.:|.:.:.|.:.:|       ||:.|.:...|| |.|::|..:|.|.|               
  Fly  1368 PEVSVNRNKDEPEILW-------VVLPLMVSTFIVSTALIVLCVVKRRRQ--------------- 1410

Human   272 SPITLQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIKATTATSVCPS-PFKMKPIGLQE 335
                      ..||      |:||...           .|.:.|.......|| |..|:.:..| 
  Fly  1411 ----------PCKT------PDQAAVT-----------RPLMAADLGAGPTPSDPVDMRRLNFQ- 1447

Human   336 RRGSNVSLTLDMSSLGN-IEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQSEFME 399
            ..|......:.:|...| ||...|  ...:|.:.||                         |.:|
  Fly  1448 TPGMISHPPIPISEFANHIERLKS--NDNQKFSQEY-------------------------ESIE 1485

Human   400 IPMNFV-DPKEIDIPRHGTKNRYKTILPNPLSRVCL-RPKNVTDSLSTYINANYIRGYSGKEKAF 462
            ....|. |...::  .:.:||||..:.....|||.| ..:.|..  |.||||||..||. |..|:
  Fly  1486 PGQQFTWDNSNLE--HNKSKNRYANVTAYDHSRVQLPAVEGVVG--SDYINANYCDGYR-KHNAY 1545

Human   463 IATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNE-KCVLYWPEKRG--IYGKVEVLVISVNE 524
            :|||||:..|..|||:|.|:..:..|||:|:|:|:.. ||..||| .||  .||::.|.:....|
  Fly  1546 VATQGPLQETFVDFWRMCWELKTATIVMMTRLEERTRIKCDQYWP-TRGTETYGQIFVTITETQE 1609

Human   525 CDNYTIRNLVL-KQG-SHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVH 587
            ...|:||...| :|| :..:.:|...:|:||||..||...|.||.:....  .|.....|||:||
  Fly  1610 LATYSIRTFQLCRQGFNDRREIKQLQFTAWPDHGVPDHPAPFLQFLRRCR--ALTPPESGPVIVH 1672

Human   588 CSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHAL 644
            ||||:|||||:|......:::|.|.::|....|..||..|..||||.:||.|:|.|:
  Fly  1673 CSAGVGRTGCYIVIDSMLERMKHEKIIDIYGHVTCLRAQRNYMVQTEDQYIFIHDAI 1729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPRRNP_002840.2 R-PTPc-R 417..642 CDD:350459 95/230 (41%)
LarNP_001260594.1 I-set 36..129 CDD:400151
Ig strand B 53..57 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 93..97 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 122..125 CDD:409353
Ig 141..228 CDD:472250
Ig strand B 157..161 CDD:409353
Ig strand C 170..174 CDD:409353
Ig strand E 192..196 CDD:409353
Ig strand F 206..211 CDD:409353
Ig strand G 218..221 CDD:409353
IgI_3_RPTP_IIa_LAR_like 237..319 CDD:409401
Ig strand A 237..239 CDD:409401
Ig strand A' 244..248 CDD:409401
Ig strand B 251..259 CDD:409401
Ig strand C 264..270 CDD:409401
Ig strand C' 272..274 CDD:409401
Ig strand D 277..281 CDD:409401
Ig strand E 286..291 CDD:409401
Ig strand F 298..305 CDD:409401
Ig strand G 309..318 CDD:409401
FN3 322..411 CDD:238020
FN3 <382..747 CDD:442628
FN3 712..810 CDD:238020
FN3 832..898 CDD:214495
FN3 <867..1269 CDD:442628
fn3 914..998 CDD:394996
R-PTPc-LAR-1 1498..1735 CDD:350401 97/240 (40%)
R-PTP-LAR-2 1784..2021 CDD:350402
Blue background indicates that the domain is not in the aligned region.

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