DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTPRO and Ptp4E

DIOPT Version :10

Sequence 1:NP_109592.1 Gene:PTPRO / 5800 HGNCID:9678 Length:1216 Species:Homo sapiens
Sequence 2:NP_525076.2 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster


Alignment Length:1332 Identity:333/1332 - (25%)
Similarity:534/1332 - (40%) Gaps:370/1332 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    36 DD--NNIVVSLEASDVISPASVYVVKITGESKNYFFEFEEFNSTLPPPVIFKASYH--------- 89
            ||  |.:.:|.|.::            ||...:|...:.|..:....|..|..:..         
  Fly   445 DDRSNALHISWEPAE------------TGRQDSYRISYHEQTNASEVPAPFPVAAESQITTNLTE 497

Human    90 --------GLYYIITLVVVNGNVVTKPSRSITVLTKPLPVTSVSIYDYKPSPETGVL-------- 138
                    |..|:|.:..::..|.:..| .||..|:|    :..:.....|.:.|::        
  Fly   498 YTLDSLLAGRRYLIAVQALSKGVASNAS-DITRYTRP----AAPLIQELRSIDQGLMLSWRSDVN 557

Human   139 -----FEIHYPEKYNVFTRVNISYWEGKDFRTMLYKDFFKGKTVFNHWL-PGMCYSNITFQLVSE 197
                 :|:||.....            ::.|||...:    .::..|:| ||..| .:....:|.
  Fly   558 SRQDRYEVHYQRNGT------------REERTMATNE----TSLTIHYLHPGSGY-EVKVHAISH 605

Human   198 ATFNKSTLVEYSGVSHEPKQHRTA--PYPPQNISVRIV--NLNKNNWEEQSGNFPEESFMRSQDT 258
                        ||..||..:..|  |.||||::::.|  ||...:|:...|:...|..:|    
  Fly   606 ------------GVRSEPHSYFQAVFPKPPQNLTLQTVHTNLVVLHWQAPEGSDFSEYVVR---- 654

Human   259 IGKEKLFHFTEETPEIPSGNISSGWPDFNSSDYETTSQPYWWDSASAAPESEDEFVSVLPMEYEN 323
                                            |.|.:.|  |...|...|:|   ..:..|.| .
  Fly   655 --------------------------------YRTDASP--WQRISGLHENE---ARIKDMHY-G 681

Human   324 NSTLSETEKSTSGSFSFFPVQMILTWLPPKPPT----AFDGFHIHIE--REENFTEYLMV----- 377
            ...|.:....:.|..|..|:::.:| :||:|.:    ..|..::.:|  |.:...::..:     
  Fly   682 ERYLVQVNTVSFGVESPHPLELNVT-MPPQPVSNVVPLVDSRNLTLEWPRPDGHVDFYTLKWWPT 745

Human   378 -DEEAHEF--VAELKE--------------PGK-YKLSVTTFSSSG--SCETRKSQSAKSL---S 419
             :|:..||  |.:|::              ||: |:..|.. ||:|  |..|..|.....|   .
  Fly   746 DEEDRVEFKNVTQLEDLSSPSVRIPIEDLSPGRQYRFEVQA-SSNGIRSGTTHLSTRTMPLIQSD 809

Human   420 FYISPSGEWIEELTEKPQHVSVHVLSSTTALMSWTSSQENYNSTIVSVVSLTCQKQKESQRLEKQ 484
            .:|:.:|.      |:.|        ..|..:|:|.:..:.....:...|:.....|:.::|...
  Fly   810 VFIANAGH------EQGQ--------DETITLSYTPTPADSTRFDIYRFSMGDPTIKDKEKLAND 860

Human   485 YCTQVNSSKPIIENLVPGAQYQVVIYLRKGPLIGPPSDPV--TFAIVPTGIKDLMLYPLGPTAVV 547
                 ...|.....|.||..|.|.::...|   |..|.||  .:.:.|..|.||....:....:.
  Fly   861 -----TERKLSFSGLTPGKLYNVTVWTVSG---GVASLPVQRLYRLHPLPISDLKAIQVAAREIT 917

Human   548 LSWTRPYLGVFRKYVVEMFYFNPATMTSEWTTYYEIAATVSLTASVRIANLLPAWYYNFRVTMVT 612
            |.||.| .|.:..:  |:.|.:......      ::...|:....:.:..|.|  |:|:..|:|.
  Fly   918 LHWTAP-AGEYTDF--ELQYLSADEEAP------QLLQNVTKNTEITLQGLRP--YHNYTFTVVV 971

Human   613 ---------WGDPELSCC--DSSTIS----FITAP-----------VAP-EIT------------ 638
                     :.|..:|..  .|:.||    .:|||           |.| |:|            
  Fly   972 RSGSIQGTDFADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPGEVTFEWSLEPAEQHG 1036

Human   639 SVEYFNSLLYISWTYGDDTTDLSHSRMLHWMVVAEGKKKIKKSVTRNVMTAILSLPPGDIYNLSV 703
            .::||.    |:....||..|:|.....  :...:||              |..|.||:.|...:
  Fly  1037 PIDYFR----ITCQNADDAADVSSYEFP--VNATQGK--------------IDGLVPGNHYIFRI 1081

Human   704 TACTERGSNTSMLRL----VKLEPAPPKSLFAVNKTQTSVTL-LWVEEG--------VADFFEVF 755
            .|.:..|.......:    :...|.|..|:..:..::||.|: :...:|        |..:..:.
  Fly  1082 QAKSALGYGAEREHIQTMPILAPPVPEPSVTPLEVSRTSSTIEISFRQGYFSNAHGMVRSYTIII 1146

Human   756 CQQVG------------------------------------SSQKTKLQEPVAVSSHVVTISS-- 782
            .:.||                                    .|:|:.|:     :.| .||.:  
  Fly  1147 AEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLE-----AEH-FTIGTAN 1205

Human   783 ------------LLPATAYNCSVTSFSHDSPSVPTFIAVSTMVTEMNPNVVVISVLAILSTLLIG 835
                        |...|.|...:.:|:.:.....| :..|.:.||.:..|:|.:.::  :.||:.
  Fly  1206 CDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDT-VYSSPITTERSDTVIVAATVS--AVLLVA 1267

Human   836 LLLVTLIILRKKHLQMARECGAGTFVNFASLERDGKLPYNWRRSIFAFLTLLPSCLWTDYLLAFY 900
            ::||  ::..:...|:.|...     ..|.::.:              |..||.         .|
  Fly  1268 MVLV--VVYCQHRCQLIRRAS-----KLARMQDE--------------LAALPE---------GY 1302

Human   901 INPWSKNGLKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCK 965
            |.|           ..||.:.||..:.:.|:.|||::||.:|||||.:|.|.....|:||.||.|
  Fly  1303 ITP-----------NRPVHVKDFSEHYRIMSADSDFRFSEEFEELKHVGRDQACSFANLPCNRPK 1356

Human   966 NRYTNILPYDFSRVRLVSMNEEEGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKS 1030
            ||:|||||||.||.:|..:::::|:|||||||:||:|||:|:|.|||||..||.:||:|..:..|
  Fly  1357 NRFTNILPYDHSRFKLQPVDDDDGSDYINANYMPGHNSPREFIVTQGPLHSTREEFWRMCWESNS 1421

Human  1031 QIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEEEQDDWACRHFRINYADEMQDVMHF 1095
            :.|||||:|.||.|.|||.|||.....:.||||.|::|.:....||:...|.::...|.:.:.||
  Fly  1422 RAIVMLTRCFEKGREKCDQYWPVDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSRNCESRIMRHF 1486

Human  1096 NYTAWPDHGVPTANAAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHE 1160
            ::|.|||.|||  ...:|:::||...|........|:|:||||||||:||||||||:||||...:
  Fly  1487 HFTTWPDFGVP--EPPQSLVRFVRAFRDVIGTDMRPIIVHCSAGVGRSGTFIALDRILQHIHKSD 1549

Human  1161 FVDILGLVSEMRSYRMSMVQTEEQYIFIHQCV 1192
            :|||.|:|..||..|:.|||||:||:.||||:
  Fly  1550 YVDIFGIVFAMRKERVFMVQTEQQYVCIHQCL 1581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPRONP_109592.1 fn3 435..521 CDD:394996 15/85 (18%)
FN3 530..630 CDD:238020 23/114 (20%)
fn3 725..805 CDD:394996 19/138 (14%)
R-PTPc-O 951..1195 CDD:350462 124/242 (51%)
Ptp4ENP_525076.2 FN3 <94..>334 CDD:442628
fn3 247..328 CDD:394996
FN3 319..>749 CDD:442628 71/392 (18%)
fn3 708..796 CDD:394996 19/88 (22%)
fn3 902..978 CDD:394996 17/86 (20%)
fn3 1013..1092 CDD:394996 20/98 (20%)
PTP_tm 1127..1247 CDD:465889 16/126 (13%)
R3-PTPc 1358..1579 CDD:350396 113/222 (51%)
Blue background indicates that the domain is not in the aligned region.

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