DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTA1 and acta1a

DIOPT Version :10

Sequence 1:NP_001091.1 Gene:ACTA1 / 58 HGNCID:129 Length:377 Species:Homo sapiens
Sequence 2:NP_001017750.1 Gene:acta1a / 550445 ZFINID:ZDB-GENE-050417-267 Length:377 Species:Danio rerio


Alignment Length:377 Identity:373/377 - (98%)
Similarity:375/377 - (99%) Gaps:0/377 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65
            |||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish     1 MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65

Human    66 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish    66 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130

Human   131 VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   131 VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195

Human   196 TERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCP 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   196 TERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCP 260

Human   261 ETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPS 325
            |||||||||||.||||||||||||||||||||||||||||:||||||||||||||||||.|||||
Zfish   261 ETLFQPSFIGMGSAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEIAALAPS 325

Human   326 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   326 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTA1NP_001091.1 ASKHA_NBD_actin 8..372 CDD:466823 360/363 (99%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 112..125 12/12 (100%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 360..372 11/11 (100%)
acta1aNP_001017750.1 ASKHA_NBD_actin 8..372 CDD:466823 360/363 (99%)

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