DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACTA1 and Acta1

DIOPT Version :10

Sequence 1:NP_001091.1 Gene:ACTA1 / 58 HGNCID:129 Length:377 Species:Homo sapiens
Sequence 2:NP_062085.1 Gene:Acta1 / 29437 RGDID:2025 Length:377 Species:Rattus norvegicus


Alignment Length:377 Identity:377/377 - (100%)
Similarity:377/377 - (100%) Gaps:0/377 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65

Human    66 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130

Human   131 VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195

Human   196 TERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCP 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 TERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCP 260

Human   261 ETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPS 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 ETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPS 325

Human   326 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTA1NP_001091.1 ASKHA_NBD_actin 8..372 CDD:466823 363/363 (100%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 112..125 12/12 (100%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 360..372 11/11 (100%)
Acta1NP_062085.1 ASKHA_NBD_actin 8..372 CDD:466823 363/363 (100%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 112..125 12/12 (100%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 360..372 11/11 (100%)

Return to query results.
Submit another query.