Sequence 1: | XP_011524010.1 | Gene: | PTPRM / 5797 | HGNCID: | 9675 | Length: | 1507 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246162.1 | Gene: | Dscam1 / 35652 | FlyBaseID: | FBgn0033159 | Length: | 2038 | Species: | Drosophila melanogaster |
Alignment Length: | 1448 | Identity: | 275/1448 - (18%) |
---|---|---|---|
Similarity: | 428/1448 - (29%) | Gaps: | 492/1448 - (33%) |
- Green bases have known domain annotations that are detailed below.
Human 30 DEPYSTCGYSQSEGDDFNWEQV------NTLTKPTSDPWMPSGSFMLVNASGRPEGQRAHLLLPQ 88
Human 89 LKENDTHCIDFH------YFVSSKSNSPPGLL--------------NVYVKVNNGPLGNPIWNIS 133
Human 134 GDPTRTWNRAELAISTFWPNFYQVI--------------FEVITSGHQGYLAIDEVKVLGHPCTR 184
Human 185 T--------PHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVT---- 236
Human 237 -SSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWI 300
Human 301 QLN-ANSINGDGPIVAREVEYCTASGSWN--DR--QPVDSTSYKIGHLDPDTEYEISVLLTRPGE 360
Human 361 G--GTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEP--------------FGYNVTR 409
Human 410 CHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHT--ITNLSPYTNVSVKLILMN-----PEGR 467
Human 468 KESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREP--TQTYGVITLYEITYKAVSSFDPEI 530
Human 531 DLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAY---E 592
Human 593 LETPLNQTDNTVTVM---------LKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIH 648
Human 649 FQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGE-- 711
Human 712 -----TKIDCVQVATKAAIIVTQLTTPYIRIAPAAGDGQLTGAATPKPVPEPEKQTDHTVKIAGV 771
Human 772 IAGILLFVIIFLGVVLVMKKRKLAKKRKETMSSTRQEMTVMVNSMDKSYAEQGTNCDEAFSFMDT 836
Human 837 HNLNGRSVSSPSSFTMKTNTLSTSVPNSYYPDPFVPTAILVPINDETHTMASDTSSLVQSHTYKK 901
Human 902 REPADVPYQTGQLH----------PAIRVADLLQHITQMKCAEGY-----GFKE----------- 940
Human 941 -----------EYESFFEGQS-------APW------------DSAKKDE---NRMKNRY---GN 969
Human 970 IIAYD-------HSRVRLQTIEGDTNSDY------INGNYI----DGYHRPNHYIATQGPMQETI 1017
Human 1018 YDFWRMVWHENTASIIMVTN--LVEVGRVKCC----KYWPDD-----TEIYKDI--------KVT 1063
Human 1064 L------IETELLAEYV--------------IRTFAVEKGGAGG----EANCSPSRE-------- 1096
Human 1097 ---VSQRGVH-------------------EIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKS 1139
Human 1140 P---------PSAGPLVVHCSAGAGRTGCFIVIDIMLDMAER-------EGVVDIY--------- 1179
Human 1180 -NCVRELRSRRVNMVQTE 1196 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PTPRM | XP_011524010.1 | MAM | 22..182 | CDD:214533 | 35/191 (18%) |
MAM | 27..182 | CDD:99706 | 35/191 (18%) | ||
IG_like | 192..278 | CDD:214653 | 19/90 (21%) | ||
ig | 192..274 | CDD:278476 | 19/86 (22%) | ||
FN3 | 282..361 | CDD:214495 | 21/83 (25%) | ||
FN3 | 383..477 | CDD:238020 | 23/114 (20%) | ||
FN3 | 499..581 | CDD:238020 | 20/83 (24%) | ||
PTPc | 937..1208 | CDD:214550 | 75/423 (18%) | ||
PTPc | 964..1208 | CDD:238006 | 64/352 (18%) | ||
PTPc | 1240..1502 | CDD:214550 | |||
PTPc | 1270..1502 | CDD:238006 | |||
Dscam1 | NP_001246162.1 | Ig | 38..130 | CDD:299845 | |
IG | 57..133 | CDD:214652 | |||
IG_like | 267..343 | CDD:214653 | |||
Ig | 269..340 | CDD:143165 | |||
IG_like | 353..425 | CDD:214653 | |||
IGc2 | 361..413 | CDD:197706 | |||
I-set | 433..527 | CDD:254352 | |||
IGc2 | 446..517 | CDD:197706 | |||
I-set | 533..618 | CDD:254352 | |||
IGc2 | 544..607 | CDD:197706 | |||
Ig | 641..714 | CDD:143165 | 17/84 (20%) | ||
IGc2 | 735..804 | CDD:197706 | 13/82 (16%) | ||
I-set | 819..914 | CDD:254352 | 21/96 (22%) | ||
Ig | 833..921 | CDD:299845 | 20/89 (22%) | ||
FN3 | 918..1011 | CDD:238020 | 26/99 (26%) | ||
FN3 | 1018..1116 | CDD:238020 | 23/116 (20%) | ||
FN3 | 1124..1217 | CDD:238020 | 23/110 (21%) | ||
FN3 | 1222..1312 | CDD:238020 | 26/132 (20%) | ||
Ig | 1339..1406 | CDD:299845 | 20/129 (16%) | ||
FN3 | 1409..1499 | CDD:238020 | 14/89 (16%) | ||
FN3 | 1504..1584 | CDD:238020 | 13/79 (16%) | ||
Dscam_C | 1890..2008 | CDD:289151 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |