DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPRM and Ptp36E

DIOPT Version :9

Sequence 1:XP_011524010.1 Gene:PTPRM / 5797 HGNCID:9675 Length:1507 Species:Homo sapiens
Sequence 2:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster


Alignment Length:677 Identity:202/677 - (29%)
Similarity:339/677 - (50%) Gaps:97/677 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   853 KTNTLSTSVPNSYYPDPFVPTAILVPINDETHTMASDTSSLVQSHTYKKREPADVPYQTGQLHPA 917
            :.|:||.::||.                                       |.|:.:       .
  Fly    70 ENNSLSKTIPNG---------------------------------------PIDIRH-------F 88

Human   918 IRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQT 982
            :::.||.:....:       :|.|:::..:.:|.....|.|..|..||:....|.||::||.|:.
  Fly    89 LKLCDLRRKFPVL-------YKLEFQTAAKVESNTCRHALKKNNLEKNQNPKCIPYDYNRVVLEK 146

Human   983 IEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCC 1047
            :.|..:|||:|.:|:|...:||.||.||||::||:..:|||||.||.::|:|:|...:..:|.|.
  Fly   147 VGGLQDSDYVNASYVDSLLKPNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCH 211

Human  1048 KYWPDDTEI---YKDIKVTLIETELLAEYVIRTFAVEKGGAGGEANCSPSREVSQRGVHEIREIR 1109
            :|||.:.|:   |.||.:.::..|.||.:.||||.:.|        .:..:||:..     |.|.
  Fly   212 QYWPPNMEVHEQYGDIFINIVREEQLANFHIRTFRLYK--------MNEKQEVTDE-----RLIL 263

Human  1110 QFHFTGWPDHGVPYHATGLLGFVRQVK-------SKSPPSAGPLVVHCSAGAGRTGCFIVIDIML 1167
            |||:|.|..|..|: :..||.|.|:|:       .......||::||||.|.||:|.::.||..|
  Fly   264 QFHYTEWYSHSCPF-SNALLEFRRRVRLVVGNIIKDEDDMRGPILVHCSDGGGRSGVYMSIDANL 327

Human  1168 DMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACLCGDTSVPASQVRSLYYDMNKL 1232
            ::||.|...:::..:::||..|..:|:..|||.||:|.:.|..:||.|..|.|::........:.
  Fly   328 ELAEEEECFNVFGYLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDRLKAKARR 392

Human  1233 DPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDILPPDRCLPFLITIDGES-SN 1296
            :..|..::.:.|:..:...||...:.||:......|.||||.:..:|||...|:|.:..|.: ::
  Fly   393 NSGTKMNEYQAEYDQICKQTPRFTIGDCAGGHRADNREKNRDVLCVPPDNFRPYLTSFQGNAFTD 457

Human  1297 YINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSVVML-NDVDPAQLCPQYWP-ENGV 1359
            |||:..:|.|.:|..:|||:.|:.:|:.:||.||.|..|::||:| .....:|..|.:|| ::.:
  Fly   458 YINSVFVDGYTKPREYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKM 522

Human  1360 HRHGPI-QVEFVSA-----------DLEEDIISRIFRIYNAARPQDGYRMVQQFQFLGWPMYRDT 1412
            .::||: .|.:|.:           .:.:.|:|....:.....|.   |.||.||...|||....
  Fly   523 EKYGPVFSVHYVMSKSYTNIKQWEFKINKKIVSLTEMMAGVKAPT---RTVQLFQLTCWPMGHKV 584

Human  1413 PVSKRSFLKLIRQVDKWQEEYNGGEGRTVVHCLNGGGRSGTFCAISIVCEMLRHQRTVDVFHAVK 1477
            |.|..|.:.|:..|:.|:.:.:  .|...|...:|..|:|.:||.:...|.:.....||||.|||
  Fly   585 PSSTNSLVYLMNMVEIWRNKVD--YGPVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQAVK 647

Human  1478 TLRNNKPNMVDLLDQYKFCYEVALEYL 1504
            |:|.::|.:|:.:.:||:||::.|.|:
  Fly   648 TVRRHRPQLVENMTEYKYCYDLVLHYV 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPRMXP_011524010.1 MAM 22..182 CDD:214533
MAM 27..182 CDD:99706
IG_like 192..278 CDD:214653
ig 192..274 CDD:278476
FN3 282..361 CDD:214495
FN3 383..477 CDD:238020
FN3 499..581 CDD:238020
PTPc 937..1208 CDD:214550 100/280 (36%)
PTPc 964..1208 CDD:238006 94/253 (37%)
PTPc 1240..1502 CDD:214550 84/276 (30%)
PTPc 1270..1502 CDD:238006 78/246 (32%)
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 95/256 (37%)
Y_phosphatase 428..671 CDD:395053 79/247 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000829
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.770

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