DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPRF and Ptp36E

DIOPT Version :10

Sequence 1:XP_005271136.1 Gene:PTPRF / 5792 HGNCID:9670 Length:1922 Species:Homo sapiens
Sequence 2:NP_609872.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster


Alignment Length:671 Identity:193/671 - (28%)
Similarity:323/671 - (48%) Gaps:91/671 - (13%)


- Green bases have known domain annotations that are detailed below.


Human  1316 DPVEMRRLNYQTPGSSVPSCPNTSSM-----------------RD----------HPPIPI---T 1350
            |.||.:    |....::.|.|||..:                 ||          :.||.|   .
  Fly    29 DDVEKQ----QRKSRAIVSIPNTIKLSMLNSGLLSFERIKLEARDENNSLSKTIPNGPIDIRHFL 89

Human  1351 DLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGV 1415
            .|.|    |:....:.:..|:::....:..|..::..:.|..||:....|.||::||:|..:.|:
  Fly    90 KLCD----LRRKFPVLYKLEFQTAAKVESNTCRHALKKNNLEKNQNPKCIPYDYNRVVLEKVGGL 150

Human  1416 PGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWP 1480
            ..|||:||:|:|...|.||||.||||:.||:..:|||||::..:.:||:|:..:.::|.|.||||
  Fly   151 QDSDYVNASYVDSLLKPNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCHQYWP 215

Human  1481 ARGT--ETCGLIQVTLLDTVELATYTVRTFALHKSGS----SEKRELRQFQFMAWPDHGVPEYPT 1539
            ....  |..|.|.:.::...:||.:.:|||.|:|...    :::|.:.||.:..|..|..| :..
  Fly   216 PNMEVHEQYGDIFINIVREEQLANFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCP-FSN 279

Human  1540 PILAFLRRVKAC--NPLD-----AGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTC 1597
            .:|.|.|||:..  |.:.     .||::||||.|.||:|.::.|||.||..:.|:..:::|::..
  Fly   280 ALLEFRRRVRLVVGNIIKDEDDMRGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFGYLKK 344

Human  1598 MRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPGESVTAMELEFKLLA 1662
            :|..|..:|:..:||.||::.|.|...||.|..|...|...::...:...|..:...:.|:..:.
  Fly   345 LRQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEYDQIC 409

Human  1663 SSKAHTSRFISANLPC-------NKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQ 1720
            .   .|.||...:  |       |:.|||.|..:|.:..|..|...:|...:||||:.|:|||.:
  Fly   410 K---QTPRFTIGD--CAGGHRADNREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTK 469

Human  1721 QKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQY------F 1779
            .:.||.|:.|:..:..:||.::::...:.:|:|.:..... ::...:|| .:|...:|      .
  Fly   470 PREYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQPPSQS-QQYPSFWP-NKSKMEKYGPVFSVH 532

Human  1780 VVDPMAEYNMPQYILREFKV-------TDARDG---QSRTIRQFQFTDWP-EQGVPKTGEGFIDF 1833
            .|...:..|:.|:   |||:       |:...|   .:||::.||.|.|| ...||.:....:..
  Fly   533 YVMSKSYTNIKQW---EFKINKKIVSLTEMMAGVKAPTRTVQLFQLTCWPMGHKVPSSTNSLVYL 594

Human  1834 IGQVH--KTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAM 1896
            :..|.  :.|..:   ||:.|....|..|.||:...:..:|::...|.||:||.|||:|..||.:
  Fly   595 MNMVEIWRNKVDY---GPVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQL 656

Human  1897 VQTEDQYQLCYRAALEYLGSF 1917
            |:...:|:.||...|.|:..|
  Fly   657 VENMTEYKYCYDLVLHYVLHF 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPRFXP_005271136.1 I-set 33..124 CDD:400151
Ig strand B 50..54 CDD:409353
Ig strand C 63..67 CDD:409353
Ig strand E 86..93 CDD:409353
Ig strand F 104..109 CDD:409353
Ig strand G 117..120 CDD:409353
IgI_2_RPTP_IIa_LAR_like 136..226 CDD:409400
Ig strand A 136..138 CDD:409400
Ig strand A' 143..147 CDD:409400
Ig strand B 150..159 CDD:409400
Ig strand C 164..170 CDD:409400
Ig strand C' 172..174 CDD:409400
Ig strand D 183..187 CDD:409400
Ig strand E 190..195 CDD:409400
Ig strand F 204..211 CDD:409400
Ig strand G 214..225 CDD:409400
IgI_3_RPTP_IIa_LAR_like 239..320 CDD:409401
Ig strand A 239..241 CDD:409401
Ig strand A' 245..249 CDD:409401
Ig strand B 252..260 CDD:409401
Ig strand C 265..271 CDD:409401
Ig strand C' 273..275 CDD:409401
Ig strand D 278..282 CDD:409401
Ig strand E 287..292 CDD:409401
Ig strand F 299..306 CDD:409401
Ig strand G 310..319 CDD:409401
FN3 <311..716 CDD:442628
FN3 714..820 CDD:238020
FN3 825..914 CDD:238020
FN3 923..1011 CDD:238020
FN3 1020..>1079 CDD:238020
R-PTPc-F-1 1350..1625 CDD:350474 95/287 (33%)
R-PTP-F-2 1627..1917 CDD:350477 82/315 (26%)
Ptp36ENP_609872.1 Y_phosphatase 125..368 CDD:459674 89/243 (37%)
Y_phosphatase 428..671 CDD:459674 71/250 (28%)
Blue background indicates that the domain is not in the aligned region.

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