Sequence 1: | XP_005271136.1 | Gene: | PTPRF / 5792 | HGNCID: | 9670 | Length: | 1922 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996413.2 | Gene: | Ptp10D / 32115 | FlyBaseID: | FBgn0004370 | Length: | 1990 | Species: | Drosophila melanogaster |
Alignment Length: | 1677 | Identity: | 416/1677 - (24%) |
---|---|---|---|
Similarity: | 653/1677 - (38%) | Gaps: | 441/1677 - (26%) |
- Green bases have known domain annotations that are detailed below.
Human 151 TATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIESSEESDQGKY-----ECVAT 210
Human 211 NSAGTRYSAPANLYVRD---QREVRRVAP-----------------------RFSIPPSSQEVMP 249
Human 250 GGSV----NLTCVAV--GAPMP---YVKWMMGAEE---------LTKEDEMPVGRNVLELSNVVR 296
Human 297 SANYTCVAISSLGMIEATAQVTV--KALPKPPIDLVVTE--TTATSVTLTWDS--GNSEPVTYYG 355
Human 356 IQYRAAGTEGPFQEVDGVATTRYSIGGLS--PFSEYAFRVLAVNSIGRGPPSEA--VRARTGEQA 416
Human 417 PSSPP-------RRVQARML------SASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPPNAWHK 468
Human 469 HNTDAGLLT------TVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEVE 527
Human 528 SDTR-----IQLSWLLPPQERIIMYELVYWAAEDEDQQHKVTFDPTSSYTLEDLKPDTLYRFQLA 587
Human 588 ARSDMGVGVFTPTIEARTAQSTPSA--------PPQKVMCVSMGSTTVRVSWVPPPADSRNGVIT 644
Human 645 QYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDE 709
Human 710 DVPSGPPRKVEVEPLNSTAVHVYWKLPV-----------PSKQHGQIRGYQV---------TYVR 754
Human 755 LENGE--------------------------PRGLPIIQ-DVMLAEAQWRPEESEDYETTIS--- 789
Human 790 GLTPETTYSVTVAAYTTKGDGARSKPKI-------VTTTGAVPGRPTMMISTTAMNTALLQWHPP 847
Human 848 KELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEI 912
Human 913 RTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQEL-QNITTDTR 976
Human 977 FTLTGLKP--DTTYDIKVRAWTS----KGSGPLSPSIQSRTMPVEQVFAKNFRVAAAMKTSVLLS 1035
Human 1036 WEVPDSYKSAV--PFKILYNG------------QSVEVDGHSMRKLIADLQPNTEYSFVLMNRGS 1086
Human 1087 SAGGLQHLVSIRTAPDLLPHKP----LPASAYIEDGRFDLSM--PHVQDPS-LVRWFYIVVVPID 1144
Human 1145 RVGGSML-TPRWSTPEELELDELLEAIEQGGEEQRRRRRQAERLKPYVAAQLDVLPETFTLGDKK 1208
Human 1209 --NYR-GFYNRPLSPDLSYQCFVLASLKEPMDQKRYASSPYSDEIVVQVTPAQQQEEPEMLWVTG 1270
Human 1271 PVLAVILIILIVIAILLFKRKRTH----SPSSKDEQSIGLKDSLLAHSSDPVEMRRLNYQTPGSS 1331
Human 1332 VPSCPNTSSMRDHPPIPITDLADNIERLKANDGLKFSQEYESI-DPGQQFTWENSNLEVNKPKNR 1395
Human 1396 YANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTAT 1460
Human 1461 VVMMTRLEEKSRVKCDQYWPARGTETC----GLIQVTLLDTVELATYTVRTFALHKSGSSEKREL 1521
Human 1522 RQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHE 1586
Human 1587 KTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEV--PARNLY 1636 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PTPRF | XP_005271136.1 | I-set | 33..124 | CDD:254352 | |
Ig | 50..121 | CDD:143165 | |||
I-set | 135..225 | CDD:254352 | 18/78 (23%) | ||
Ig2_RPTP_IIa_LAR_like | 152..226 | CDD:143215 | 17/78 (22%) | ||
IG_like | 242..319 | CDD:214653 | 18/94 (19%) | ||
Ig3_RPTP_IIa_LAR_like | 250..318 | CDD:143216 | 16/85 (19%) | ||
FN3 | 323..412 | CDD:238020 | 20/96 (21%) | ||
FN3 | 419..511 | CDD:238020 | 30/110 (27%) | ||
FN3 | 516..605 | CDD:238020 | 16/93 (17%) | ||
fn3 | 613..700 | CDD:278470 | 24/86 (28%) | ||
FN3 | 714..820 | CDD:238020 | 31/162 (19%) | ||
FN3 | 825..914 | CDD:238020 | 11/88 (13%) | ||
FN3 | 923..1011 | CDD:238020 | 29/94 (31%) | ||
FN3 | 1020..>1079 | CDD:238020 | 15/72 (21%) | ||
PTPc | 1366..1621 | CDD:214550 | 115/259 (44%) | ||
PTPc | 1392..1621 | CDD:238006 | 108/232 (47%) | ||
PTPc | 1657..1912 | CDD:214550 | |||
PTPc | 1682..1912 | CDD:238006 | |||
Ptp10D | NP_996413.2 | fn3 | 124..205 | CDD:278470 | 19/97 (20%) |
fn3 | 220..304 | CDD:278470 | 17/85 (20%) | ||
fn3 | 315..391 | CDD:278470 | 20/97 (21%) | ||
FN3 | 405..494 | CDD:238020 | 27/99 (27%) | ||
FN3 | 511..574 | CDD:238020 | 14/77 (18%) | ||
FN3 | 583..671 | CDD:238020 | 28/99 (28%) | ||
fn3 | 683..753 | CDD:278470 | 11/69 (16%) | ||
fn3 | 787..850 | CDD:278470 | 17/76 (22%) | ||
fn3 | 866..935 | CDD:278470 | 24/126 (19%) | ||
fn3 | 961..1043 | CDD:278470 | 18/88 (20%) | ||
PTPc | 1272..1525 | CDD:214550 | 114/257 (44%) | ||
PTPc | 1298..1525 | CDD:238006 | 107/231 (46%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3031 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |