Sequence 1: | XP_006719591.1 | Gene: | PTPRB / 5787 | HGNCID: | 9665 | Length: | 2230 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
Alignment Length: | 1857 | Identity: | 409/1857 - (22%) |
---|---|---|---|
Similarity: | 689/1857 - (37%) | Gaps: | 550/1857 - (29%) |
- Green bases have known domain annotations that are detailed below.
Human 673 LKNS-ERCQGRTVPLAVLQLRVKHANETSLSI--------MWQTPVAEWEKYIISLADRDLLLI- 727
Human 728 ----HKSLSKDAKEFTFTDLVP-GR------------KYMATVTSISGDLKNSSSVKGRTVPAQV 775
Human 776 TDLHVANQGMTSSLFTNWT-QAQGDVEFYQVLLIHENVVIKNESISS----ETSRYSFHSLKSGS 835
Human 836 LYSVVVTTVSGGISSRQVVVEGRTVPS----------SVSGVTVNNSGRN--------DYLSVSW 882
Human 883 LLAP-----GDVDNYEV---TLSHDGKVVQSLVIAKSVRECSFSSLTPGRLYTVTIT--TRSGKY 937
Human 938 ENHSFSQERTVPDKV---QGV--SVSNSARSDY----LRVSW---VHATGDFDHYEV----TIKN 986
Human 987 KNNFIQTKSIPKSENECVFVQLVPGRLYSVTVTTKSGQYEANEQGNGRTIP----------EPVK 1041
Human 1042 DLTLRNRSTEDLHVTW-----SGANGDVDQYEI--------------------QLLFNDMKVFPP 1081
Human 1082 FHLVNTATEYRF-----TSLTPGRQYKILVLTISGDVQQSAFIEGFTVPSAVKNIHISPNGATDS 1141
Human 1142 LTVNWTP-----GGGDVDSYTVSAFRHSQKVDSQTIPKHVFEHTFHRLEAGEQYQIMIASVSGSL 1201
Human 1202 KNQINVVGRTVPASVQGVIADNAYSSYSLIVSWQKAAGVAER-YDILLLTENGILLRNT------ 1259
Human 1260 -SEPATTKQHKFEDLTPGKKYKIQILTVSGGLFSKEAQTEGRTVPAAVTDLRITENSTRHLSFRW 1323
Human 1324 TASEGELSWYNIFLYNPDGNLQERAQVDPLVQSFSFQNLLQGRMYKMVIV--THSGELSNESFIF 1386
Human 1387 GRT-------VPASVSHLRGSNRNTTDSLWFNWSPASG----------DFDFYELILYNPNGTKK 1434
Human 1435 ENWKDKDLTEWRFQGLVPGRKYVLWVVTH----SGDLSNKVTAESR--TAPSPPSLMSFADIANT 1493
Human 1494 SLAITWKGPPDWTDYNDFELQWLPRDALTVFNPYNNRKSEGRIVYGLRPGRSYQFNVKTVSG-DS 1557
Human 1558 WKT-------------------YSKPIFG-------------SVRTKPDKIQ-NLHCRPQNSTAI 1589
Human 1590 ACSWIPP--------DSDFDGYSIECRKMDTQEVEFSRKLEKEKSLL-------NIMMLVPHKRY 1639
Human 1640 LVSIKVQSAGMTSEVVED------STITMIDRPPPPPPHIR------VNEKDVLISKSSINFTVN 1692
Human 1693 CSWFSDTNGAVKYFTVVVREADGS-----------DELKPEQQHPLPSYLEYRHNASIRVYQTNY 1746
Human 1747 FASKCAENPNSNSKSFNIKLGAEMESLGGKCDPTQQKFCDGPLKPHTAYRISIRAFTQLFDEDLK 1811
Human 1812 EFTKPLYSDTFFSLPITT--------ESEPLFGAIEGVSAG--------------LFLIGMLVAV 1854
Human 1855 VALLICRQKVSHGRER-------------------------PSARLSIRRDRPLSVHLNLGQKGN 1894
Human 1895 RKTSCPIKINQFEGHFMKLQADSNYLLSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDA 1959
Human 1960 TRVKLSNVDDDPCSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVE 2024
Human 2025 KGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDH 2089
Human 2090 GVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAV 2154
Human 2155 HDLRLHRVHMVQTECQYVYLHQCVRDVL-------RARKLRSEQENPL--------------FPI 2198
Human 2199 YENVN-----------PEYHRGGHLLHLLPQVSSSRY 2224 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PTPRB | XP_006719591.1 | RICIN | <22..94 | CDD:238092 | |
fn3 | 255..319 | CDD:278470 | |||
fn3 | 331..407 | CDD:278470 | |||
fn3 | 422..488 | CDD:278470 | |||
FN3 | 507..582 | CDD:238020 | |||
fn3 | 596..672 | CDD:278470 | |||
fn3 | 687..765 | CDD:278470 | 16/103 (16%) | ||
fn3 | 774..847 | CDD:278470 | 16/77 (21%) | ||
fn3 | 862..938 | CDD:278470 | 22/103 (21%) | ||
fn3 | 950..1026 | CDD:278470 | 23/91 (25%) | ||
fn3 | 1039..1112 | CDD:278470 | 15/102 (15%) | ||
fn3 | 1126..1199 | CDD:278470 | 12/77 (16%) | ||
fn3 | 1216..1294 | CDD:278470 | 16/85 (19%) | ||
fn3 | 1305..1378 | CDD:278470 | 13/74 (18%) | ||
fn3 | 1394..1466 | CDD:278470 | 15/85 (18%) | ||
fn3 | 1480..1562 | CDD:278470 | 16/101 (16%) | ||
fn3 | 1574..1649 | CDD:278470 | 17/90 (19%) | ||
PTPc | 1920..2178 | CDD:214550 | 106/257 (41%) | ||
PTPc | 1947..2178 | CDD:238006 | 98/230 (43%) | ||
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | 9/30 (30%) | ||
Ig | 159..228 | CDD:299845 | 9/31 (29%) | ||
I-set | 234..318 | CDD:254352 | 14/83 (17%) | ||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | 11/67 (16%) | ||
fn3 | 324..404 | CDD:278470 | 18/92 (20%) | ||
FN3 | 423..514 | CDD:238020 | 20/99 (20%) | ||
FN3 | 520..610 | CDD:238020 | 23/99 (23%) | ||
FN3 | 616..707 | CDD:238020 | 15/99 (15%) | ||
FN3 | 712..810 | CDD:238020 | 25/130 (19%) | ||
FN3 | 832..907 | CDD:238020 | 20/125 (16%) | ||
FN3 | 914..1005 | CDD:238020 | 19/99 (19%) | ||
FN3 | 1012..1101 | CDD:238020 | 18/122 (15%) | ||
fn3 | 1106..1198 | CDD:278470 | 19/102 (19%) | ||
PTPc | 1476..1731 | CDD:214550 | 106/259 (41%) | ||
PTPc | 1503..1731 | CDD:238006 | 98/231 (42%) | ||
PTPc | 1763..2022 | CDD:214550 | 11/45 (24%) | ||
PTPc | 1791..2022 | CDD:238006 | 7/17 (41%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3031 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |