DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZNF410 and CG2120

DIOPT Version :9

Sequence 1:NP_001229853.1 Gene:ZNF410 / 57862 HGNCID:20144 Length:516 Species:Homo sapiens
Sequence 2:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster


Alignment Length:202 Identity:55/202 - (27%)
Similarity:85/202 - (42%) Gaps:31/202 - (15%)


- Green bases have known domain annotations that are detailed below.


Human   239 TVEGCDRTFVWPAHFKYHLKTHRNDRSFICPAEGCGKSFYVLQRLKVHMRTHNGEKPFMCHESGC 303
            |.:.|||.|....:.:.|..||.:::..:|..  |||.|..|.:|::|..||..|:|..|  ..|
  Fly   100 TCDICDRRFSEAYNLRIHKMTHTDEKPHVCVE--CGKGFRQLNKLRIHAVTHTAERPHKC--DIC 160

Human   304 GKQFTTAGNLKNHRRIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVV-HSG------EKP------ 355
            ||.|..|..|..|||:||||||:.|.|..|..||....:.|.|..: |:.      |.|      
  Fly   161 GKGFRYANYLTVHRRLHTGEKPYPCLATDCHLSFHSIHARRIHTKLRHAAQTDPDPEHPLAEQEQ 225

Human   356 -------HQCQVCGKTFSQSGSRNVHMRKHHLQLGAAGSQEQEQTAEPLMGSSLLEEASVPSKNL 413
                   ..|.||.:..:.....::|:::|:       :|......:|..|......:.:....:
  Fly   226 RDTSALSFTCPVCSRVLTDQCYLSIHLKRHY-------NQRDFPCPQPECGKRFFSASELKHHQI 283

Human   414 VSMNSQP 420
            .....:|
  Fly   284 AHTQQRP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF410NP_001229853.1 zf-C2H2_8 268..351 CDD:292531 35/83 (42%)
C2H2 Zn finger 271..290 CDD:275370 7/18 (39%)
zf-H2C2_2 283..309 CDD:290200 11/25 (44%)
C2H2 Zn finger 298..320 CDD:275368 10/21 (48%)
zf-H2C2_2 312..338 CDD:290200 14/25 (56%)
C2H2 Zn finger 328..350 CDD:275368 7/22 (32%)
zf-H2C2_2 342..367 CDD:290200 8/44 (18%)
C2H2 Zn finger 358..378 CDD:275368 4/19 (21%)
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 5/19 (26%)
zf-H2C2_2 113..138 CDD:290200 8/26 (31%)
C2H2 Zn finger 129..149 CDD:275368 8/21 (38%)
zf-H2C2_2 142..166 CDD:290200 11/25 (44%)
COG5048 151..>264 CDD:227381 34/121 (28%)
C2H2 Zn finger 157..177 CDD:275368 10/21 (48%)
C2H2 Zn finger 185..206 CDD:275368 7/20 (35%)
C2H2 Zn finger 235..255 CDD:275368 4/19 (21%)
C2H2 Zn finger 263..285 CDD:275368 2/21 (10%)
C2H2 Zn finger 293..313 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.