DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPRA and Ptp52F

DIOPT Version :10

Sequence 1:NP_001372231.1 Gene:PTPRA / 5786 HGNCID:9664 Length:813 Species:Homo sapiens
Sequence 2:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster


Alignment Length:542 Identity:157/542 - (28%)
Similarity:236/542 - (43%) Gaps:129/542 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    38 PSVGITRLINSSTAEPVKEEAKTSNPTSS---------LTSLS-----VAPTFSPNITLGPTYLT 88
            |::....||....|. |:|   |||||.:         :||.|     :|...|.....|..:|.
  Fly   868 PTIPSDELIKQMRAN-VEE---TSNPTKTAIVRLPADIMTSASGDIKWMALMISQKNCAGVPHLK 928

Human    89 TVNSSD----------SDNGT-------------------------TRTASTNSIGITIS----- 113
            ...|||          ..:||                         ....|...|..||.     
  Fly   929 YDVSSDWPKVLSYQEAGADGTGDCSLEYQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCS 993

Human   114 ------PNGTWLPDNQFTDARTEPWEGNSSTAATTPETFPPSGNSDSKDRRDET----PIIAVMV 168
                  .||..|||..:.               .....|..||.||:.....:|    .:..::|
  Fly   994 EVQKTYCNGPLLPDTDYN---------------VVVRLFTASGYSDAAVLNFKTKAAIKVTLILV 1043

Human   169 ALSSLLVIVFI--IIVLYMLRFKKYKQAGSHSNSFRLSNGRTEDVEPQSVPLLARSPSTNRKYPP 231
            ::.|.|::.|:  :.||::.:...:|:...            :.:|.....::|::.:.      
  Fly  1044 SVCSCLLLAFVLGLTVLWVRKRLAWKRDSG------------QGIEDPFGNVIAKNFAI------ 1090

Human   232 LPVDKLEEEINRRMADDNKLFREEFNALPACPIQATCEAASKEENKEKNRYVNILPYDHSRVHL- 295
                     ....:|...||.| ||..:....::.:..|:  |....||||.:|.|||.:||.| 
  Fly  1091 ---------FYTEVAKPEKLAR-EFKEITVVALELSYSAS--ELGCHKNRYADIFPYDKNRVILD 1143

Human   296 TPVEGVPDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECK 360
            ...||   |||||||||:|:..|.::||.||||.|:|.||||||.:.|...||.||..:|....|
  Fly  1144 IDAEG---SDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIK 1205

Human   361 CAQYWPDQGCWTYGNIRVSVEDVTVLVDYTVRKFCIQQVGDMTNRKPQRLITQFHFTSWPDFGVP 425
            |.:|:|    :....:.|:::...||..|...:..:  |.|....|.:  :..::|..|||.|||
  Fly  1206 CHEYYP----YNVRGLTVTIKSKEVLELYDRTELTV--VHDKYGLKEK--VIHYYFKKWPDHGVP 1262

Human   426 FTPIGMLKFLKKVKA-CNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHTERKVDVYGFVSRIR 489
            ..|:.::.|:||||| ..|.|: .|||||||||||||||:.:|.::..:.:|.|::::..|.::|
  Fly  1263 EDPMHLIMFVKKVKAEKRPSYS-PIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLR 1326

Human   490 AQRCQMVQTDMQYVFIYQALLE 511
            .||.:||||..||.|:|....|
  Fly  1327 FQRMKMVQTQQQYTFLYACTYE 1348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPRANP_001372231.1 R-PTPc-A-1 225..520 CDD:350469 110/289 (38%)
R-PTPc-A-2 574..801 CDD:350471
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 108/259 (42%)
Blue background indicates that the domain is not in the aligned region.

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