DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTPRA and Pez

DIOPT Version :10

Sequence 1:NP_001372231.1 Gene:PTPRA / 5786 HGNCID:9664 Length:813 Species:Homo sapiens
Sequence 2:NP_609013.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster


Alignment Length:604 Identity:139/604 - (23%)
Similarity:219/604 - (36%) Gaps:181/604 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    26 ICVSANNATTVAPSVGITRLINSSTAEPVKEE--------------AKTSNPTSSLTSLSVAPTF 76
            :..|::.:.|.||   :.|.:.:.:.||:.|.              |.|.......:|:..||..
  Fly   706 VVASSHKSATPAP---LQRSLVNGSIEPIYENVPLPQRASGGSSGAANTEAMRQRASSIQSAPGV 767

Human    77 SP-----NITLGPTYLTTVNSSDSDN-----GTTRTASTN--------------------SIGIT 111
            .|     |.:.......||||...|.     |..|.|||.                    .:|.|
  Fly   768 VPVPAARNASSNNVVTVTVNSPPDDGNIKKYGADRAASTELLFLEPQAPKRTNRAASAAPDMGAT 832

Human   112 --------------------ISPNGTWLPDNQFTDARTEPWEGNSSTAATTPETF-----PPSGN 151
                                |:|.|..| ..||:....     :::|:|:|...|     ..|.:
  Fly   833 PPPRQHRSTASLNKSSTVDMITPAGDTL-QQQFSAMNL-----SANTSASTSSMFNSTLDTTSSS 891

Human   152 SDSKD----------RRDETPIIAVMVALSSLLVIVFIIIVLYMLRFKKYKQAGSHS-------- 198
            :.|||          .|.:||.......|..                :|...||.||        
  Fly   892 AASKDLKRKKRWNFLSRSKTPDKQKSATLGR----------------EKATTAGQHSKLAAKLKL 940

Human   199 --NSFRLSNGRTEDV-EPQSVPLLARSPSTNRKYPPLPVDKLEEEINRRMADDNKLFREEFNALP 260
              :...|.|..:..| :||  |:..|...          |||.:.:::::: |::||. ||..:|
  Fly   941 AQDDLNLPNRWSTGVNKPQ--PISGRYSK----------DKLCQILDQKLS-DSQLFM-EFERIP 991

Human   261 ACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDS--DYINASFING-YQEKNKF- 321
            .....|..|.|..|||:.||...|.||||.:||.|||..   |:  .|:|||.|:. ...|.:| 
  Fly   992 KRREHALYECALLEENEPKNHDPNFLPYDDNRVRLTPCR---DNRHGYVNASSISATVGTKQRFY 1053

Human   322 IAAQGPKEE-TVNDFWRMIWEQNTATIVMVT--------NLKERKECKCAQYWPDQGCWTYGNIR 377
            |.||.|:|. |:..||:.:||.:...:|.:|        |..:|.|              :|..:
  Fly  1054 IVAQSPQEPLTMRIFWQCVWEADVYLVVQLTEDMSYIPRNSHQRLE--------------FGQFQ 1104

Human   378 VSVEDVTVLVDYTVRKFCIQQVGDMTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKA-- 440
            |..|........|..|..:..|..    :..|.:....:..|.:...|......|.||:::.:  
  Fly  1105 VYQEFSQTTDRCTTIKLRLYHVPS----RRYRSVWYLQYADWAEQNCPRDVNHFLDFLEELNSVR 1165

Human   441 ------------CNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHTERKVDVYGFVSRIRAQRC 493
                        .||    .:::||..|.||:|..:..|.:|..:.....:|:...:.::|.||.
  Fly  1166 LASTQEVPPGHNTNP----PVLLHCLEGGGRSGVTLTADLLLYTLDHNEDLDIPRVIGQLRHQRD 1226

Human   494 QMVQTDMQYVFIYQALLEH 512
            .::.:..||.|||..|:.:
  Fly  1227 SIIPSLAQYKFIYNLLITY 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPRANP_001372231.1 R-PTPc-A-1 225..520 CDD:350469 82/315 (26%)
R-PTPc-A-2 574..801 CDD:350471
PezNP_609013.1 FERM_F1_PTPN14_like 17..107 CDD:340619
FERM_M 112..230 CDD:459788
FERM_C_PTPN14_PTPN21 225..317 CDD:270009
PTP_DSP_cys 1036..1246 CDD:475123 54/232 (23%)
Blue background indicates that the domain is not in the aligned region.

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