DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPN12 and CG42327

DIOPT Version :9

Sequence 1:NP_002826.3 Gene:PTPN12 / 5782 HGNCID:9645 Length:780 Species:Homo sapiens
Sequence 2:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster


Alignment Length:296 Identity:86/296 - (29%)
Similarity:137/296 - (46%) Gaps:66/296 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    61 KNRYKDILPFDHSRVKLTLKTPSQDSDYINANFIKGVY-GPKAYVATQGPLANTVIDFWRMIWEY 124
            ||||.:::|...:||.|..:.....::|||||:::|.. .|..|:|.|.||.:|..||||||||.
  Fly  1135 KNRYANVIPLPETRVVLQRQGDDDKTEYINANYVRGPRDAPNYYIACQAPLESTTSDFWRMIWEQ 1199

Human   125 NVVIIVMACREFEMGRKKCERYWPLYG--EDPITFAPFKISCEDEQARTDYFIRTLLLEFQN--E 185
            ...:|:.|....|.|.::|..|.|...  ::..::..::::.:..:.:..|.|.||:|:..:  |
  Fly  1200 QSRVIIQATDLSENGIERCAEYLPPSATLDNHSSYGDYQVTLKHREVKDRYAISTLVLKRVDGEE 1264

Human   186 SRRLYQFHYVNWPDHDVPSSFDSILDMI----SLMRKY--------------------------- 219
            ||.|..:.| .||:..||:....|:.|:    |.::.|                           
  Fly  1265 SRELTHYWY-KWPEAGVPAEEAPIIAMLLEARSSLKSYSLEQANELREKSATLETSMDADGSKAE 1328

Human   220 ----QEHE--------------DVPICIHCSAGCGRTGAICAIDYTWNLLKAGK----IPEEFNV 262
                ..||              ..|:.:|||.|.||||.|.|.|.....|:..|    ||:    
  Fly  1329 AGSTSSHEINGNISSRSGTRSQQGPLTVHCSPGTGRTGTIIASDMAIRSLETPKRSVDIPQ---- 1389

Human   263 FNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQL 298
              |:..:|..|.||||||||||.::: :|.::..::
  Fly  1390 --LVYYVRRGRASAVQTKEQYEFIYK-VASMYAAKI 1422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPN12NP_002826.3 PTPc 28..292 CDD:214550 85/288 (30%)
PTPc 60..292 CDD:238006 85/288 (30%)
Substrate binding. /evidence=ECO:0000305|PubMed:27134172 63..67 2/3 (67%)
Substrate binding. /evidence=ECO:0000250 231..237 3/5 (60%)
Interaction with TGFB1I1. /evidence=ECO:0000250 345..438
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 502..639
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 657..725
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 744..780
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 85/287 (30%)
Y_phosphatase 1134..1415 CDD:278528 85/287 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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