DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTPN3 and ptpn3

DIOPT Version :10

Sequence 1:XP_011517190.1 Gene:PTPN3 / 5774 HGNCID:9655 Length:934 Species:Homo sapiens
Sequence 2:XP_687930.5 Gene:ptpn3 / 407635 ZFINID:ZDB-GENE-030131-2934 Length:839 Species:Danio rerio


Alignment Length:910 Identity:494/910 - (54%)
Similarity:629/910 - (69%) Gaps:83/910 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    22 MTSRLRALGGRINNIRTSELPK--EKTRSEVICSIHFLDGVVQTFKVTKQDTGQVLLDMVHNHLG 84
            |||....||.:|..:..::|.|  ...||.::|.:.|.||..|.|.|.|.|.|.:|.|:...||.
Zfish     1 MTSPWCMLGNKITALGRADLSKHTHMPRSGLLCLVLFPDGTTQNFTVNKHDAGHLLFDLACEHLN 65

Human    85 VTEKEYFGLQHDDDSVDSPRWLEASKAIRKQLKGGFPCTLHFRVRFFIPDPNTLQQEQTRHLYFL 149
            :.||:||.:|..:|:..|||||:.:|..:|||||..|..|.|||||||.|||:||.|||||.|||
Zfish    66 IVEKQYFSMQISEDTSSSPRWLDPNKPFKKQLKGSPPFFLMFRVRFFISDPNSLQHEQTRHFYFL 130

Human   150 QLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQNEDFLTKVESLHE 214
            |::.|||||||.|||:||||||||:|||..||||... ..||||.:||||:|:::||.||||||.
Zfish   131 QIRKDICEGRLKCPLSSAVVLASYSVQSELGDYNPET-PTGYLSKTHFIPEQDQEFLLKVESLHP 194

Human   215 QHSGLKQSEAESCYINIARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNI 279
            ||.||.||:||.||:|.|||||.||||||..:|..|..:.:||.|.|||::...||:||:||:||
Zfish   195 QHKGLSQSDAELCYLNTARTLDLYGVELHHAQDASNPAVWVGITSGGVALFCHLICSSFFPWINI 259

Human   280 LKISFKRKKFFIHQRQKQAESREHIVAFNMLNYRSCKNLWKSCVEHHTFFQAKKLLPQEKNVLSQ 344
            :|||||||:||:|.|:|..|...|:|:.:|.|.|:|||||:|||:||||:..|.           
Zfish   260 IKISFKRKRFFVHLRRKHGELGHHVVSLSMPNSRACKNLWRSCVDHHTFYNRKP----------- 313

Human   345 YWTMGSRNTKKSVNNQYCKKVIGGMVWNPAMRRSLSVEHLETKSLPSRSPPITPNWRSPRLRHEI 409
                 |.:..|..:....:|::|..:.|| |.||.|||.||||||||||||.||||||||:||:.
Zfish   314 -----SHSASKLSSIPLYRKLVGEQMLNP-MVRSSSVEQLETKSLPSRSPPNTPNWRSPRVRHDF 372

Human   410 RKPRHSSADNLANEMTYITETEDVFYTYKGSLAPQDSDSEVSQNRSPHQESLSENNPAQSYLTQK 474
            |.||.||.|||.|||:|:||:|||||||                |.|.:|             ::
Zfish   373 RNPRPSSVDNLTNEMSYVTESEDVFYTY----------------RKPQEE-------------ER 408

Human   475 SSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDED 539
            .|.|.|..                 ||.       :.|:...:..||:...|..|:|:||:||:|
Zfish   409 RSGSWSHG-----------------DDI-------TIEEDDLHVWDKSVTADGDLLLVRISPDQD 449

Human   540 GKFGFNLKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASR 604
            ||||||:||||||||||.:|.:|..|||..|:|.|.||||::||||||||||||.||||||||||
Zfish   450 GKFGFNVKGGVDQKMPLAISHVNLASPAGRCVPPLMEGDQVLLINGRDISEHTHQQVVMFIKASR 514

Human   605 ESHSRELALVIRRRAVRSFADFKSED--ELNQLFPEAIFPMCPE-GGDTLEGSMAQLKKGLESGT 666
            ||||:||||::||:.|    ..:.|.  :|....|..|.|:... .|:|||.|||:|:|||.:||
Zfish   515 ESHSKELALLVRRKGV----SLRVEPTLQLGLTLPGEISPLSTHPSGETLEESMARLEKGLVTGT 575

Human   667 VLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQ-GNEDYINASYVNMEIPAAN 730
            :|:.||:|||||.|:.::.||..:|:||||||||||||.|||:|| ..:||||||:|..|  .|.
Zfish   576 LLLHFEKLYRKKEGMLMSCAKQSENMDKNRYKDVLPYDITRVVLQEEGDDYINASHVKTE--PAG 638

Human   731 LVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQC 795
            .|.:|||.||||||||..||:.||:|.:::|:||||||||||||||||||.||:|.::|...:.|
Zfish   639 CVLQYIAAQGPLPHTCTHFWRSVWEQDVNVIIMLTTLTERGRTKCHQYWPHPPEVRDYGYLQVCC 703

Human   796 QSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVL 860
            .||:|.:|||:|::.:||||:|::.::||||||||||||||:||||||:||..|||:|.:|.|::
Zfish   704 HSEECNLAYVTRQLTLTNTQSGQQRSITHLQYVAWPDHGVPEDSSDFLDFVKSVRSMRQESVPLM 768

Human   861 VHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSSQYKFVCEAILRVYEE 925
            |||||||||||||:||||||.|.|:..|:|||:::..||:||||:||||.|:.||||||||||.|
Zfish   769 VHCSAGIGRTGVLITMETAMTLMEKEKPVYPLEVITLMREQRAMLVQTSCQFTFVCEAILRVYRE 833

Human   926  925
            Zfish   834  833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPN3XP_011517190.1 B41 52..243 CDD:214604 116/190 (61%)
FERM_C_PTPN4_PTPN3_like 237..330 CDD:270010 52/92 (57%)
PDZ_PTPN3-4-like 527..616 CDD:467190 65/88 (74%)
PTPc-N3 652..925 CDD:350448 175/273 (64%)
ptpn3XP_687930.5 B41 33..223 CDD:214604 116/190 (61%)
PH-like 217..309 CDD:473070 51/91 (56%)
PDZ_PTPN3-4-like 437..526 CDD:467190 65/88 (74%)
PTP_DSP_cys 561..833 CDD:475123 175/273 (64%)

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